CK938954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.210e-21 Identity = 61/228 (26.75%), Postives = 117/228 (51.32%), Query Frame = 2 Query: 23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI-YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALS--KHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMG 697 ++ ++ + C YES + WG+ +G++Y S+ ED T +H +GW S Y+ P+ P FLG+ ++++Q RW++G ++V +K PL+ ++ + +AY + + + +P + +P C+LH L+P+ L + + + L+ + L+E + G SI+ W Q W I A + L+ + I+ LGL++ F + K E + G+G Sbjct: 430 IEAAQEVGHCDYESQTSWGKTIGWLYDSMSEDMNTSIG-IHSRGWTSSYIAPDPPAFLGSMPPGGLEAMIQQRRWATGSIEVLFNKQSPLLGLFCRKLRFRQRVAYLCVSI--CVRSIPELIYCLLPAYCLLHNSALFPKGLC----LGITMLLAGMHCLYTLWEFMCLGHSIQSWYVSQSFWRIVATSSWLFSIFDIILKLLGLSKNVFLVSKKTMPVETMSGSGIG 650
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20 Identity = 61/214 (28.50%), Postives = 105/214 (49.07%), Query Frame = 2 Query: 17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658 ++LQE +C YE + WG+ VG++Y+ ED T F+ LH GWRS+Y E F GT+ NL + L Q RWS G +++ S CPL+ G R++ ++ +AY ++ +P+ + L+ + P + + GI + + V V + + E+ G ++ W ++ ++I A L+ ++ GL SF T K Sbjct: 544 SILQELSDAMACAYEDGTDWGKDVGWVYNIATEDVVTGFR-LHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLAG-RRLNFMQRIAYINMTGYPVTSVFLLF-YLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAK 754
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20 Identity = 60/217 (27.65%), Postives = 111/217 (51.15%), Query Frame = 2 Query: 23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI-YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKH----LYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658 L+ ++ + C YE + WG+ +G++Y S ED T +H +GW S Y+ P+ P FLG + +VQ RW++GL+++ +K PLI ++ +S+AY + + L +P + +P C+LH L+P+ +++ + ++ + H L+E ++ G SI+ W Q I+ L+ L+ I+ LG+++ F T K Sbjct: 430 LETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIG-IHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVFSWG-LRSIPELFYCLLPAYCLLHNSALFPK------GVYLGIIITLVGIHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKK 638
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 66/253 (26.09%), Postives = 124/253 (49.01%), Query Frame = 2 Query: 8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCP---LIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV-------------ADDEQVKLYGMGKFDFRTS 718 S + L++ ++ + C YE + WG +G+MY S+ ED T +H +GW S +++P+ P F+G++ T +++VQ RW++G ++V +K P + +G ++ + +AY L +P + +P C+LH L+P+ I V + L L++ +S G S++ W Q +W I A + L+ + I+ LG+++ F K ++ V +GKF+F +S Sbjct: 425 SLANLIEAAQEVGHCHYEYQTSWGN-LGWMYDSVAEDINTSVG-IHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWATGAIEVLFNKQSPFMGMFHG--KIKFRQRLAY--FWALMCLRSIPELIYCLLPAYCLLHDSALFPKG-PCLCTIVTLVGMHCLYS-LWQFMSLGFSVQSWYVVQSLWRIIATSSWLFSIQDIILKLLGISQIGFVIAKKTIPETKSVYESKPSQGEDDVPKLNLGKFEFDSS 669
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 65/253 (25.69%), Postives = 125/253 (49.41%), Query Frame = 2 Query: 8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK----------------VADDEQVKLYGMGKFDFRTS 718 S + L++ ++ + C YE + WG +G++Y S+ ED T +H +GW S +++P+ P FLG++ + +++VQ RW++G ++V +K PLI ++ + +AY + + +P + +P C+L+ L+P+ I V + L++ + G S+K W Q +W I A + L+ + I+ LG+++ F K +D+ +KL +GKF+F +S Sbjct: 425 SLANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIG-IHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEVLFNKQSPLIGFRRKIKFRQRLAY--FWVLMCIRSIPELVYCLLPAYCLLNNSALFPK--GPCLGIIVTLVGMHCLYTLWQFMILGFSVKSWYVSQSLWRIIATSSWLFSIQDIILKLLGISKIGFIVAKKNMPETRSGYESKSKPSQGEDDGLKL-ELGKFEFDSS 670
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 60/216 (27.78%), Postives = 105/216 (48.61%), Query Frame = 2 Query: 14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGP-PRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658 S+ + +K +A+C YE + WG++VG++Y SL ED T +++H GWRS + E P F+G + L Q RW+SG +++ IS+ P++ + + +AY ++P+ L C+A + C+L P+ I + +F++ + E + G S + N R+ I + + L L I+ LG +E F T K Sbjct: 425 SSCVDVAKEVAACNYEIGTCWGQEVGWVYGSLTEDVLTG-QRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEILISRNNPILTTTFKSLQFRQCLAYLHSYVWPVRAPFEL-CYALLGPYCLLSNQSFLPKTSEDGFYIALALFIAYNTYMFMEFIECGQSARACWNNHRMQRITSASAWLLAFLTVILKTLGFSETVFEVTRK 638
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19 Identity = 62/214 (28.97%), Postives = 112/214 (52.34%), Query Frame = 2 Query: 23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSK-HLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHK-LGLAEASFSATNK 658 + E + + +C YE ++WG+ VG++Y ED T F+ LH KGWRS+Y E F GT+ NL + L Q RWS G +++ S+ CPL+ G R+ ++ +AYA++ +P ++ L + + +P + + H + + S+ ++ ++ + L E+ G ++ W ++ +MI A L L+ ++ + LGL F T K Sbjct: 534 MAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFR-LHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAG-CRLRPMQRVAYANMTAYP-VSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRNEQFYMIGATGVYLAAVLHIVLKRLLGLKGVRFKLTAK 744
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18 Identity = 52/211 (24.64%), Postives = 105/211 (49.76%), Query Frame = 2 Query: 17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFL-SALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFS 646 +LL+E+ + SC +E ++WG+++G+MY V F ++H +GW S Y +P RP F + + D L +R + + + +S+ ++ R+ LL+ + Y +PL + LPL + +P +C+L G +P +S + + + L S + E+ + ++ W ++++WM+ A + L I+ + +FS Sbjct: 518 SLLKEAIHVVSCAFEERTRWGKEIGWMYGGGVATGF----RMHARGWSSAYCSPARPAFRRYARASPADVLAGASRRAVAAMGILLSRRHSPVWAGRRLGLLQRLGYVARASYPLAS-LPLTVYCALPAVCLLTGKSTFPSDVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWRDEKLWMVTATSASLAAVFQGILSACTGIDVAFS 723
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18 Identity = 61/223 (27.35%), Postives = 107/223 (47.98%), Query Frame = 2 Query: 23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV-ADDEQVKLY 688 + E+ + + YE + WG +G++Y ++ ED T ++ +H KGWRS Y + F+GT+ NL + L Q RWS+G +++ S+ PL +G + L+ +AY ++ +P L L + TVP L + G + + V + L + EV G ++ W + WM + + L L + + + SF T+K+ A DE+ Y Sbjct: 605 IAEAVMVTAAAYEKKTGWGSDIGWVYGTVTEDVVTGYR-MHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNPL-FGSTFLHPLQRVAYINITTYP-FTALFLIFYTTVPALSFVTGHFIVQRPTTMFYVYLAIVLGTLLILAVLEVKWAGVTVFEWFRNGQFWMTASCSAYLAAVLQVVTKVVFRRDISFKLTSKLPAGDEKKDPY 824
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 69/219 (31.51%), Postives = 107/219 (48.86%), Query Frame = 2 Query: 23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIY-GPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHL--YEVLSTGGS----IKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658 + E+ L SC YE + WG VG++Y ++ ED T F +H +GWRS Y F GT+ NL D L Q RW++G +++ S+ L+ G R+ L+ AY + ++P + L L + P + ++ G + ++ +P +V FL+AL L VL T S + WRNEQ WM+ A + L + E SF T+K Sbjct: 498 IAEASALVSCAYEDGTAWGRDVGWVYGTVTEDVATGFC-MHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRAAYLNTTVYPFTS-LFLMAYCLFPAIPLIAGGGGWN---AAPTPTYV-AFLAALMVTLAAVAVLETRWSGIALGEWWRNEQ-FWMVSATSAYLAAVAQVALKVATGKEISFKLTSK 709 The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bpback to top |