CK938954

Overview
NameCK938954
Unique NameCK938954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.210e-21
Identity = 61/228 (26.75%), Postives = 117/228 (51.32%), Query Frame = 2
Query:   23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI-YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALS--KHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKVADDEQVKLYGMG 697
            ++ ++ +  C YES + WG+ +G++Y S+ ED  T    +H +GW S Y+ P+ P FLG+      ++++Q  RW++G ++V  +K  PL+     ++   + +AY  + +   +  +P   +  +P  C+LH   L+P+ L     + + + L+ +     L+E +  G SI+ W   Q  W I A +  L+   + I+  LGL++  F  + K    E +   G+G
Sbjct:  430 IEAAQEVGHCDYESQTSWGKTIGWLYDSMSEDMNTSIG-IHSRGWTSSYIAPDPPAFLGSMPPGGLEAMIQQRRWATGSIEVLFNKQSPLLGLFCRKLRFRQRVAYLCVSI--CVRSIPELIYCLLPAYCLLHNSALFPKGLC----LGITMLLAGMHCLYTLWEFMCLGHSIQSWYVSQSFWRIVATSSWLFSIFDIILKLLGLSKNVFLVSKKTMPVETMSGSGIG 650          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20
Identity = 61/214 (28.50%), Postives = 105/214 (49.07%), Query Frame = 2
Query:   17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658
            ++LQE     +C YE  + WG+ VG++Y+   ED  T F+ LH  GWRS+Y   E   F GT+  NL + L Q  RWS G +++  S  CPL+ G  R++ ++ +AY ++  +P+ +   L+ +   P + +  GI    +   +     V V   +    + E+   G ++  W   ++ ++I A        L+ ++   GL   SF  T K
Sbjct:  544 SILQELSDAMACAYEDGTDWGKDVGWVYNIATEDVVTGFR-LHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLAG-RRLNFMQRIAYINMTGYPVTSVFLLF-YLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAK 754          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20
Identity = 60/217 (27.65%), Postives = 111/217 (51.15%), Query Frame = 2
Query:   23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLI-YGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKH----LYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658
            L+ ++ +  C YE  + WG+ +G++Y S  ED  T    +H +GW S Y+ P+ P FLG       + +VQ  RW++GL+++  +K  PLI     ++   +S+AY  +  +  L  +P   +  +P  C+LH   L+P+       +++ + ++ +  H    L+E ++ G SI+ W   Q    I+     L+  L+ I+  LG+++  F  T K
Sbjct:  430 LETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIG-IHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVFSWG-LRSIPELFYCLLPAYCLLHNSALFPK------GVYLGIIITLVGIHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKK 638          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20
Identity = 66/253 (26.09%), Postives = 124/253 (49.01%), Query Frame = 2
Query:    8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCP---LIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV-------------ADDEQVKLYGMGKFDFRTS 718
            S + L++ ++ +  C YE  + WG  +G+MY S+ ED  T    +H +GW S +++P+ P F+G++ T   +++VQ  RW++G ++V  +K  P   + +G  ++   + +AY        L  +P   +  +P  C+LH   L+P+       I   V +  L   L++ +S G S++ W   Q +W I A +  L+   + I+  LG+++  F    K                ++ V    +GKF+F +S
Sbjct:  425 SLANLIEAAQEVGHCHYEYQTSWGN-LGWMYDSVAEDINTSVG-IHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWATGAIEVLFNKQSPFMGMFHG--KIKFRQRLAY--FWALMCLRSIPELIYCLLPAYCLLHDSALFPKG-PCLCTIVTLVGMHCLYS-LWQFMSLGFSVQSWYVVQSLWRIIATSSWLFSIQDIILKLLGISQIGFVIAKKTIPETKSVYESKPSQGEDDVPKLNLGKFEFDSS 669          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20
Identity = 65/253 (25.69%), Postives = 125/253 (49.41%), Query Frame = 2
Query:    8 SSSTLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK----------------VADDEQVKLYGMGKFDFRTS 718
            S + L++ ++ +  C YE  + WG  +G++Y S+ ED  T    +H +GW S +++P+ P FLG++ +   +++VQ  RW++G ++V  +K  PLI    ++   + +AY    +   +  +P   +  +P  C+L+   L+P+       I V +        L++ +  G S+K W   Q +W I A +  L+   + I+  LG+++  F    K                  +D+ +KL  +GKF+F +S
Sbjct:  425 SLANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIG-IHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEVLFNKQSPLIGFRRKIKFRQRLAY--FWVLMCIRSIPELVYCLLPAYCLLNNSALFPK--GPCLGIIVTLVGMHCLYTLWQFMILGFSVKSWYVSQSLWRIIATSSWLFSIQDIILKLLGISKIGFIVAKKNMPETRSGYESKSKPSQGEDDGLKL-ELGKFEFDSS 670          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19
Identity = 60/216 (27.78%), Postives = 105/216 (48.61%), Query Frame = 2
Query:   14 STLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGP-PRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658
            S+ +  +K +A+C YE  + WG++VG++Y SL ED  T  +++H  GWRS  +  E P F+G +       L Q  RW+SG +++ IS+  P++      +   + +AY    ++P+     L C+A +   C+L      P+       I + +F++  +    E +  G S +   N  R+  I + +  L   L  I+  LG +E  F  T K
Sbjct:  425 SSCVDVAKEVAACNYEIGTCWGQEVGWVYGSLTEDVLTG-QRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEILISRNNPILTTTFKSLQFRQCLAYLHSYVWPVRAPFEL-CYALLGPYCLLSNQSFLPKTSEDGFYIALALFIAYNTYMFMEFIECGQSARACWNNHRMQRITSASAWLLAFLTVILKTLGFSETVFEVTRK 638          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19
Identity = 62/214 (28.97%), Postives = 112/214 (52.34%), Query Frame = 2
Query:   23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSK-HLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHK-LGLAEASFSATNK 658
            + E + + +C YE  ++WG+ VG++Y    ED  T F+ LH KGWRS+Y   E   F GT+  NL + L Q  RWS G +++  S+ CPL+ G  R+  ++ +AYA++  +P ++ L +  +  +P + + H    + +   S+   ++   ++ +    L E+   G ++  W   ++ +MI A    L   L+ ++ + LGL    F  T K
Sbjct:  534 MAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFR-LHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAG-CRLRPMQRVAYANMTAYP-VSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRNEQFYMIGATGVYLAAVLHIVLKRLLGLKGVRFKLTAK 744          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18
Identity = 52/211 (24.64%), Postives = 105/211 (49.76%), Query Frame = 2
Query:   17 TLLQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFL-SALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFS 646
            +LL+E+  + SC +E  ++WG+++G+MY   V   F    ++H +GW S Y +P RP F   +  +  D L   +R +   + + +S+    ++   R+ LL+ + Y     +PL + LPL  +  +P +C+L G   +P  +S    + + + L S  +    E+  +   ++ W  ++++WM+ A +  L      I+      + +FS
Sbjct:  518 SLLKEAIHVVSCAFEERTRWGKEIGWMYGGGVATGF----RMHARGWSSAYCSPARPAFRRYARASPADVLAGASRRAVAAMGILLSRRHSPVWAGRRLGLLQRLGYVARASYPLAS-LPLTVYCALPAVCLLTGKSTFPSDVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWRDEKLWMVTATSASLAAVFQGILSACTGIDVAFS 723          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 61/223 (27.35%), Postives = 107/223 (47.98%), Query Frame = 2
Query:   23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIYGPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHLYEVLSTGGSIKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNKV-ADDEQVKLY 688
            + E+  + +  YE  + WG  +G++Y ++ ED  T ++ +H KGWRS Y +     F+GT+  NL + L Q  RWS+G +++  S+  PL +G   +  L+ +AY ++  +P    L L  + TVP L  + G  +     +        V  + L   + EV   G ++  W    + WM  + +  L   L  +   +   + SF  T+K+ A DE+   Y
Sbjct:  605 IAEAVMVTAAAYEKKTGWGSDIGWVYGTVTEDVVTGYR-MHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNPL-FGSTFLHPLQRVAYINITTYP-FTALFLIFYTTVPALSFVTGHFIVQRPTTMFYVYLAIVLGTLLILAVLEVKWAGVTVFEWFRNGQFWMTASCSAYLAAVLQVVTKVVFRRDISFKLTSKLPAGDEKKDPY 824          
BLAST of CK938954 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16
Identity = 69/219 (31.51%), Postives = 107/219 (48.86%), Query Frame = 2
Query:   23 LQESKFLASCGYESNSKWGEKVGFMYHSLVEDYFTXFKQLHCKGWRSVYLNPERPQFLGTSTTNLNDSLVQGTRWSSGLVQVAISKYCPLIY-GPPRMSLLESMAYADLGMFPLLNCLPLWCFATVPHLCVLHGIPLYPEVLSSSSPIFVFVFLSALSKHL--YEVLSTGGS----IKIWRNEQRIWMIRAVTCQLYGSLNAIMHKLGLAEASFSATNK 658
            + E+  L SC YE  + WG  VG++Y ++ ED  T F  +H +GWRS Y       F GT+  NL D L Q  RW++G +++  S+   L+  G  R+  L+  AY +  ++P  + L L  +   P + ++ G   +    ++ +P +V  FL+AL   L    VL T  S     + WRNEQ  WM+ A +  L       +      E SF  T+K
Sbjct:  498 IAEASALVSCAYEDGTAWGRDVGWVYGTVTEDVATGFC-MHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRAAYLNTTVYPFTS-LFLMAYCLFPAIPLIAGGGGWN---AAPTPTYV-AFLAALMVTLAAVAVLETRWSGIALGEWWRNEQ-FWMVSATSAYLAAVAQVALKVATGKEISFKLTSK 709          
The following BLAST results are available for this feature:
BLAST of CK938954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLB2_ARATH3.210e-2126.75Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLF8_ORYSJ1.593e-2028.50Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]
CSLB4_ARATH1.593e-2027.65Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB5_ARATH6.053e-2026.09Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLB6_ARATH7.906e-2025.69Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
CSLH1_ORYSJ1.349e-1927.78Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLF9_ORYSJ3.004e-1928.97Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CESAB_ORYSJ1.947e-1824.64Putative cellulose synthase A catalytic subunit 11... [more]
CSLF6_ORYSJ7.400e-1827.35Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]
CSLF7_ORYSJ1.823e-1631.51Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_B05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938954 ID=CK938954; Name=CK938954; organism=Citrus sinensis; type=EST; length=720bp
TAATGATTCATCAAGCACTTTGCTACAAGAGAGCAAATTTTTGGCCTCAT
GTGGCTATGAAAGTAACTCAAAATGGGGTGAAAAGGTTGGTTTTATGTAT
CATTCTCTTGTTGAAGATTACTTCACGNGATTTAAACAACTACACTGCAA
AGGATGGAGATCGGTGTATCTTAACCCGGAAAGGCCGCAATTTTTGGGCA
CTTCTACAACAAACTTAAATGACTCGTTGGTTCAAGGCACGAGATGGAGT
TCGGGATTGGTTCAAGTAGCAATCTCAAAGTATTGCCCTCTGATATATGG
ACCACCGAGGATGTCTTTGCTTGAAAGCATGGCCTATGCTGACCTTGGAA
TGTTCCCTCTTCTTAATTGCTTGCCTCTGTGGTGCTTTGCCACTGTCCCT
CATCTCTGCGTATTGCATGGCATCCCATTGTACCCTGAGGTTTTAAGTTC
ATCTTCCCCCATATTCGTATTCGTTTTCCTATCGGCGCTTTCTAAACATC
TATACGAGGTTCTTTCAACTGGTGGATCAATCAAGATATGGAGAAATGAA
CAGAGAATATGGATGATAAGGGCAGTCACATGCCAACTTTATGGAAGCTT
AAATGCCATTATGCACAAGCTTGGCTTAGCTGAAGCCAGTTTCTCGGCCA
CAAATAAAGTCGCGGATGATGAACAAGTGAAGCTCTACGGAATGGGCAAG
TTCGATTTCCGAACATCAAA
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