CK938950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.286e-22 Identity = 51/54 (94.44%), Postives = 54/54 (100.00%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCS+S Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.286e-22 Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+AL+IFSNRGKLYEFCSS Sbjct: 8 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 9.215e-21 Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LK IENKINRQVTFAKRR LLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS+ Sbjct: 8 LKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSST 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.572e-20 Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS------SRYTH 223 LKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+ RY H Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQH 71
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 2.681e-20 Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 LKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+ Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 5.973e-20 Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 205 +KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S Sbjct: 8 MKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 59
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RG+L+EF +SS Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RG+L+EF +SS Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF SSS Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF SSS Sbjct: 8 LKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSS 61 The following BLAST results are available for this feature:
BLAST of CK938950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938950 ID=CK938950; Name=CK938950; organism=Citrus sinensis; type=EST; length=489bpback to top |