CK938950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.871e-19 Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS------RYTHMHTDMLSPKQLNSYN 268 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS RG+LYE+ ++S RY +D ++P + N Sbjct: 23 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEAN 101
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.871e-19 Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS------RYTHMHTDMLSPKQLNSYN 268 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS RG+LYE+ ++S RY +D ++P + N Sbjct: 23 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEAN 101
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 6.604e-19 Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS----------RYTHMHTDMLSP 247 L+RIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVAL++FS+ G+LY+F SSS RY + D +P Sbjct: 8 LQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAP 83
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19 Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSRYTHMHTDMLSPKQLNSYN*MKIMKHNTK 298 L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S S +L Q S++ +++ NT+ Sbjct: 8 LRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSM----EGILERYQRYSFDERAVLEPNTE 86
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19 Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSRYTHMHTDMLSPKQLNSYN*MKIMKHNTK 298 L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S S +L Q S++ +++ NT+ Sbjct: 8 LRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSM----EGILERYQRYSFDERAVLEPNTE 86
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL++FSNRG+LYE+ ++S Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNS 77
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.126e-18 Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSR 214 LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ + SR Sbjct: 8 LKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSR 62
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.921e-18 Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS------RYTHMHTDMLSPKQLNSYN 268 +KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEV+LIIFS +GKLYEF SS+ RY D +S K ++ N Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEEN 86
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.921e-18 Identity = 48/79 (60.76%), Postives = 57/79 (72.15%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS------RYTHMHTDMLSPKQLNSYN 268 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE+ ++S RY TD + ++ N Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEAN 102
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.921e-18 Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF SSS Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSS 61 The following BLAST results are available for this feature:
BLAST of CK938950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938950 ID=CK938950; Name=CK938950; organism=Citrus sinensis; type=EST; length=489bpback to top |