CK938950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.509e-18 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S Sbjct: 8 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.509e-18 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 77
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.509e-18 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 77
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 77
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ ++S Sbjct: 24 IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 77
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.280e-18 Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S+S Sbjct: 8 MKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASAS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 5.590e-18 Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKINRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS +GKLYE+ + S Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 5.590e-18 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS----------RYTHMHTDMLSPK 250 LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS++GKL+E+ + S RY++ +++P+ Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPE 84
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 5.590e-18 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS----------RYTHMHTDMLSPK 250 LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS++GKL+E+ + S RY++ +++P+ Sbjct: 8 LKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPE 84
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 5.590e-18 Identity = 42/54 (77.78%), Postives = 49/54 (90.74%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE+ +++ Sbjct: 8 IKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNN 61 The following BLAST results are available for this feature:
BLAST of CK938950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938950 ID=CK938950; Name=CK938950; organism=Citrus sinensis; type=EST; length=489bpback to top |