CK938950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18 Identity = 45/76 (59.21%), Postives = 58/76 (76.32%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS----------RYTHMHTDMLSP 247 LKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV+LI+FS++GKL+E+ S S RY++ +++P Sbjct: 8 LKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAP 83
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18 Identity = 42/54 (77.78%), Postives = 52/54 (96.30%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVAL+IFS++GKL+E+ + S Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18 Identity = 42/54 (77.78%), Postives = 52/54 (96.30%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ + S Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.245e-17 Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVAL+IFS R KLYEF SSS Sbjct: 8 MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17 Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NRQVTF KRR+GLLKKAYELSVLCDAEVAL++FS+RG+LYE+ ++S Sbjct: 50 IKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 103
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17 Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 LKRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYEF S+ Sbjct: 8 LKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17 Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 LKRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYEF S+ Sbjct: 8 LKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17 Identity = 40/50 (80.00%), Postives = 48/50 (96.00%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF 199 +KRIENK +RQVTF KRRNGLLKKAYEL++LCDAE+ALI+FS+RG+LYEF Sbjct: 8 IKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEF 57
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17 Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17 Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +GKL+E+ + S Sbjct: 8 LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS 61 The following BLAST results are available for this feature:
BLAST of CK938950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938950 ID=CK938950; Name=CK938950; organism=Citrus sinensis; type=EST; length=489bpback to top |