CK938950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.750e-14 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSRYTHMHTDM 238 +KRIEN+ NRQVT++KRRNGL KKA EL+VLCDA+V++I+ S+ GKL+EF S S T D+ Sbjct: 8 IKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDL 70
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.750e-14 Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-------SRYTHMHTDML 241 +KRIENK +RQVTF+KRRNGL++KA +LSVLCDA VAL++ S GKLY F S RY H D L Sbjct: 8 IKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDL 78
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.750e-14 Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 ++RI++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ GKLY+F SSS Sbjct: 8 IQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSRYTHMHTDMLSPKQLNSYN*MKI 280 +K+I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+++ SSS +L + L+S N K+ Sbjct: 8 IKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSM-----KQILERRDLHSKNLEKL 79
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSRYTHMHTDM 238 +KRIEN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+FS+ KL+E+ S + T D+ Sbjct: 8 IKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDL 70
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.396e-14 Identity = 34/54 (62.96%), Postives = 47/54 (87.04%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 ++RI+N +RQVTF+KRRNG+ KKA EL++LCDAEV L+IFS+ G+LYE+ S+S Sbjct: 8 IRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.396e-14 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRI+N +RQVTF+KRR+GL KKA ELS+LCDAEV L++FS+ +LY+F SSS Sbjct: 8 IKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.396e-14 Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 205 LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ ++IFS +GKL+E + Sbjct: 8 LKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELAT 59
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIEN NR VTF+KRRNGL+KKA E++VLCDA+VALIIF++ GK+ ++C S Sbjct: 8 IKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 34/52 (65.38%), Postives = 44/52 (84.62%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 205 +KRIEN NRQVTF+KRR G+LKKA E+ VLCDAEV ++IFS+ GKL ++C+ Sbjct: 8 IKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCT 59 The following BLAST results are available for this feature:
BLAST of CK938950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938950 ID=CK938950; Name=CK938950; organism=Citrus sinensis; type=EST; length=489bpback to top |