CK938950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 ++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++GKL+E ++ Sbjct: 8 MRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 34/52 (65.38%), Postives = 44/52 (84.62%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 205 LK+IEN NRQVTF+KRR GLLKKA EL++LCDA++ +I+FS GK+YE+ S Sbjct: 8 LKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSS 59
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 35/54 (64.81%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +++I++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN KLY+F SSS Sbjct: 8 IQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 33/52 (63.46%), Postives = 45/52 (86.54%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 205 +KRIE+ RQVTF+KRR G LKKA EL+VLCDA+V +++FS++GKL++FCS Sbjct: 8 MKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCS 59
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 +KRIE+ RQVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F SSS Sbjct: 8 IKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.431e-13 Identity = 35/57 (61.40%), Postives = 48/57 (84.21%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSRYT 220 +KRIEN+ NRQVT++KRRNGL KKA+ELSVLCDA+V++I+ S+ KL+E+ S + T Sbjct: 8 IKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTAT 64
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.146e-13 Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 205 +K+IEN+ RQVTF+KRR GL+KK ELS+LCDA + LI+FS GKL EFCS Sbjct: 8 IKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCS 59
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13 Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS GKL++F S+S Sbjct: 27 IRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTS 80
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 7.072e-13 Identity = 32/53 (60.38%), Postives = 46/53 (86.79%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 ++RIEN+++RQVTF+KRR GLLKKA+E++VLCD +VA I+FS +G L+ + SS Sbjct: 8 VRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASS 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ Sbjct: 8 LRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60 The following BLAST results are available for this feature:
BLAST of CK938950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938950 ID=CK938950; Name=CK938950; organism=Citrus sinensis; type=EST; length=489bpback to top |