CK938950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 9.236e-13 Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ Sbjct: 8 LRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.575e-12 Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 211 ++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FS+ GKL +F SS+ Sbjct: 8 IRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSN 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 2.687e-12 Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 + RI ++ NRQVTF KR+ G++KKAYELSVLCD E+ALIIFS+ KLY++ S+ Sbjct: 8 ISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYAST 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.510e-12 Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 ++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ S+ Sbjct: 8 IQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.510e-12 Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 ++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ S+ Sbjct: 8 IQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.510e-12 Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 ++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ S+ Sbjct: 8 IQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: MEF2D_HUMAN (Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.510e-12 Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 208 ++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ S+ Sbjct: 8 IQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.510e-12 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-------SRYTHMHTDMLSPKQL 256 +KRIENK +RQVTF+KRRNGL++KA +LS+LC++ +A+++ S GKLY+ S RY H D L L Sbjct: 8 IKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHADELEALDL 83
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.987e-12 Identity = 29/52 (55.77%), Postives = 43/52 (82.69%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 205 +++I N+ NRQ TF KR+NGL+KKA ELS+LCD E+A+I+FS+ KL+++ S Sbjct: 10 IEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSS 61
BLAST of CK938950 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.987e-12 Identity = 31/52 (59.62%), Postives = 45/52 (86.54%), Query Frame = 2 Query: 50 LKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 205 +++IENK NRQVTF+KRRNG++KKA EL+VLCDA+V+L++ S+ KL+ + S Sbjct: 8 IRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLS 59 The following BLAST results are available for this feature:
BLAST of CK938950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938950 ID=CK938950; Name=CK938950; organism=Citrus sinensis; type=EST; length=489bpback to top |