CK938862

Overview
NameCK938862
Unique NameCK938862
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_SHEEP (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Ovis aries GN=ATP1A1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.664e-33
Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL  +L+G
Sbjct:  693 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPQTDKLVNERLISMAYGQIGMIQALGGFFTYFVIMAENGFLPNHLLG 883
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_HUMAN (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Homo sapiens GN=ATP1A1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.664e-33
Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL  +L+G
Sbjct:  695 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPIHLLG 885
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_BUFMA (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Bufo marinus GN=ATP1A1 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.664e-33
Identity = 79/191 (41.36%), Postives = 115/191 (60.21%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIGIAMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  + D  +    I   Y  IG+   +     + +      FL + L+G
Sbjct:  695 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIADIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKKDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSTLLG 885
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_BOVIN (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Bos taurus GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.664e-33
Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL  +L+G
Sbjct:  693 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPQTDKLVNERLISMAYGQIGMIQALGGFFTYFVIMAENGFLPNHLLG 883
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_XENLA (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Xenopus laevis GN=atp1a1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.785e-33
Identity = 79/191 (41.36%), Postives = 115/191 (60.21%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIGIAMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL   L+G
Sbjct:  697 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPWTLLG 887
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_RABIT (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Oryctolagus cuniculus GN=ATP1A1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.785e-33
Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL  +L+G
Sbjct:  695 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPFHLLG 885
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_HORSE (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Equus caballus GN=ATP1A1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.785e-33
Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL  +L+G
Sbjct:  693 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPQTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPIHLLG 883
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_PONAB (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Pongo abelii GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.249e-33
Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL  +L+G
Sbjct:  695 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISTAYGQIGMIQALGGFFTYFVILAENGFLPLHLLG 885
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A1_CANFA (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Canis familiaris GN=ATP1A1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.249e-33
Identity = 77/191 (40.31%), Postives = 115/191 (60.21%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGI G++ +K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          IP  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL T+L+G
Sbjct:  693 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIVGSDASKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPTHLLG 883
[Close]
BLAST of CK938862 vs. ExPASy Swiss-Prot
Match: AT1A_TORCA (Sodium/potassium-transporting ATPase subunit alpha OS=Torpedo californica PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 78/191 (40.84%), Postives = 116/191 (60.73%), Query Frame = 3 
Query:   12 PRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDDFSTIVSAVGEGRSIYNNMKAFIRYMISSNIGEVASIFFTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPR--RSDDSLISAWILFRYLVIGLYVGIATVGVFIIWYTHGSFLGTNLIG 578
            P+ K  IV   +  G +VA+TGDGVND+PALK ADIG+AMGIAG++V+K+A+DM+L DD+F++IV+ V EGR I++N+K  I Y ++SNI E+          +P  L  V +L ++L TD  PA +L +   + DIMK+ PR  ++D  +    I   Y  IG+   +     + +      FL  +LIG
Sbjct:  694 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIANVPLPLGTVTILCIDLGTDMVPAISLAYERAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPIDLIG 884
The following BLAST results are available for this feature:
BLAST of CK938862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 309
Match NameE-valueIdentityDescription
AT1A1_SHEEP3.664e-3340.84Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_HUMAN3.664e-3340.84Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_BUFMA3.664e-3341.36Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_BOVIN3.664e-3340.84Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_XENLA4.785e-3341.36Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_RABIT4.785e-3340.84Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_HORSE4.785e-3340.84Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_PONAB6.249e-3340.84Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A1_CANFA6.249e-3340.31Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A_TORCA8.162e-3340.84Sodium/potassium-transporting ATPase subunit alpha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004437_D07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938862 ID=CK938862; Name=CK938862; organism=Citrus sinensis; type=EST; length=845bp
GGGGGGCTGAACCAAGGCACAAGCAAGAGATAGTGAGACTGCTTAAAGAA
GATGGGGAGGTAGTTGCCATGACTGGCGATGGAGTAAATGATGCTCCTGC
TCTGAAACTGGCTGATATTGGAATTGCCATGGGGATTGCTGGAACCGAGG
TTGCAAAGGAAGCTTCCGACATGGTATTGGCAGATGATGATTTTAGTACC
ATTGTTTCTGCTGTTGGTGAGGGCAGATCCATTTACAACAACATGAAGGC
TTTTATCAGGTACATGATATCTTCAAACATCGGTGAGGTCGCCTCTATAT
TCTTTACAGCAGCTTTAGGTATACCTGAAGGCCTGATACCTGTCCAGCTT
CTGTGGGTCAATCTTGTTACGGATGGACCTCCTGCAACAGCATTGGGATT
CAATCCTCCAGATAAAGACATAATGAAGAAACCCCCTCGTCGGAGTGATG
ACTCTCTAATTTCTGCTTGGATTTTATTCCGCTATCTGGTTATCGGGCTG
TATGTTGGAATAGCAACGGTTGGTGTTTTCATCATTTGGTATACACATGG
TTCTTTCTTGGGCACCAATCTCATTGGCGACGGTCACAGCCTTGTCACAT
ACTCCCAGCTCACTAACTGGGGCCAGTGCCCATCCTGGGGGAATTTTACC
GTTTCTCCCTTCACAGCTGGTAATCAGGTTTTCACATTCAATGATAACCC
TTGTGATTATTTCCATGGCGGCAAAGTAAAAGCAATGACACTTTCTCTTT
CTGTGCTGGTCGCCATTGAAATGTTTAACTCCCTCAATGCCCTCTCTGAG
GATGGAAGCCTATTGACAATGCCCCCATGGGNNNACCCTTGGCTC
back to top