EY649579 | Citrus Genome Database

Overview


Name	EY649579
Unique Name	EY649579
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	827

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7838	contig	Csv1_Contig7838:430..1253.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 3.999e-93
Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ+I SLT SL+ DGA+NVDVTEF TNLVPYPRIHFMLSSYAPVISA+KAYHEQLS  EITN+ FEPSSMMAKCDPRHGKYMA CLMYRGDV P DVNAAV TI T R +Q +D CPTGFKCGINYQP
Sbjct:  232 SQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVVTIKTKRTVQFVDXCPTGFKCGINYQP 359

HSP 2 Score: 137.887 bits (346), Expect = 3.999e-93
Identity = 69/92 (75.00%), Postives = 73/92 (79.35%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L +NAV             ERL  DYGKKSKLGFT+YPSPQVST+V EPYNSVLSTHSLLEHTDVA LLD+EAIYDIC RSLDIERPTYTNL
Sbjct:  136 LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNL 227

HSP 3 Score: 27.7202 bits (60), Expect = 3.999e-93
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LADNCTGLQG   F
Sbjct:  123 RQLADNCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA2_ANEPH (Tubulin alpha-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 5.225e-93
Identity = 109/130 (83.85%), Postives = 114/130 (87.69%), Query Frame = 2

Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            L SQ+I SLT SL+ DGALNVDVTEF TNLVPYPRIHFMLSSYAPVISA KAYHEQLS  EITN+ FEPSSMMAKCDPRHGKYMA CLMYRGDV P DVNAAVATI T R +Q +DWCPTGFKCGINYQP
Sbjct:  146 LVSQIISSLTTSLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQP 275

HSP 2 Score: 133.265 bits (334), Expect = 5.225e-93
Identity = 69/93 (74.19%), Postives = 73/93 (78.49%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRS-LDIERPTYTNL 351
            L +NAV             ERL  DYGKKSKLGFT+YPSPQVST+V EPYNSVLSTHSLLEHTDVA LLD+EAIYDIC RS LDIERPTYTNL
Sbjct:   51 LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLLDIERPTYTNL 143

HSP 3 Score: 26.1794 bits (56), Expect = 5.225e-93
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++L+DNCTGLQG   F
Sbjct:   38 RKLSDNCTGLQGFLVF 53

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_EUPOC (Tubulin alpha chain OS=Euplotes octocarinatus PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 5.534e-93
Identity = 109/128 (85.16%), Postives = 116/128 (90.62%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI SLTASL+ DGALNVDVTEF TNLVPYPRIHFMLSSYAPVISA+KAYHEQLS AEITNS+FEP+SMMAKCDPRHGKYMA C+MYRGDV P DVNAAVATI T R IQ +DW PTGFKCGINYQP
Sbjct:  232 AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSSFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQP 359

HSP 2 Score: 129.798 bits (325), Expect = 5.534e-93
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL FT+YPSPQVST+V EPYNSVLSTHSLLEHTDVA +LD+EA+YDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLTFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNL 227

HSP 3 Score: 26.5646 bits (57), Expect = 5.534e-93
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 2

Query:   35 QELADNCTGLQG 70
            ++LADNCTGLQG
Sbjct:  123 RKLADNCTGLQG 134

HSP 4 Score: 22.7126 bits (47), Expect = 5.534e-93
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 3

Query:   12 VDLCLDRIR 38
            VDLCLDRIR
Sbjct:  115 VDLCLDRIR 123

HSP 5 Score: 21.9422 bits (45), Expect = 5.534e-93
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 1

Query:  748 PTVVPRGDLA 777
            PTVVP GDLA
Sbjct:  360 PTVVPGGDLA 369

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA2_STYLE (Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.135e-93
Identity = 111/128 (86.72%), Postives = 116/128 (90.62%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI SLTASL+ DGALNVDVTEF TNLVPYPRIHFMLSS APVISA+KAYHEQLS AEITNSAFEP+SMMAKCDPRHGKYMA CLMYRGDV P DVNAAVATI T R IQ +DWCPTGFKCGINYQP
Sbjct:  232 AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSS-APVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQP 358

HSP 2 Score: 134.42 bits (337), Expect = 6.135e-93
Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L +N+V             ERL  DYGKKSKLGFT+YPSPQVST+V EPYNSVLSTHSLLEHTDVA +LD+EA+YDIC R+LDIERPTYTNL
Sbjct:  136 LVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 6.135e-93
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

HSP 4 Score: 22.3274 bits (46), Expect = 6.135e-93
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 1

Query:  748 PTVVPRGDLA 777
            PTVVP GDLA
Sbjct:  359 PTVVPSGDLA 368

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.216e-92
Identity = 109/128 (85.16%), Postives = 117/128 (91.41%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI SLTASL+ DGALNVDVTEF TNLVPYPRIHFMLSSYAPV+SA+KAYHEQLS +EITNSAFEP++MMAKCDPRHGKYMA CLMYRGDV P DVNAAVATI T R IQ +DWCPTGFKCGINYQP
Sbjct:  232 AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQP 359

HSP 2 Score: 125.946 bits (315), Expect = 1.216e-92
Identity = 63/92 (68.48%), Postives = 70/92 (76.09%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L ++AV             ERL  DYGKKSKL F  +PSPQVST+V EPYNSVLSTHSLLEHTDVA +LD+EAIYDIC R+LDIERPTYTNL
Sbjct:  136 LMFSAVGGGTGSGFGCLMLERLSVDYGKKSKLNFCCWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 27.7202 bits (60), Expect = 1.216e-92
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCFT 85
            ++LADNCTGLQG   F+
Sbjct:  123 RKLADNCTGLQGFLMFS 139

HSP 4 Score: 21.9422 bits (45), Expect = 1.216e-92
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 1

Query:  748 PTVVPRGDLA 777
            PTVVP GDLA
Sbjct:  360 PTVVPGGDLA 369

HSP 5 Score: 21.1718 bits (43), Expect = 1.216e-92
Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3

Query:   12 VDLCLDRIR 38
            +D+CLDRIR
Sbjct:  115 IDVCLDRIR 123

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.673e-92
Identity = 109/128 (85.16%), Postives = 117/128 (91.41%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI SLTASL+ DGALNVDVTEF TNLVPYPRIHFMLSSYAPV+SA+KAYHEQLS +EITNSAFEP++MMAKCDPRHGKYMA CLMYRGDV P DVNAAVATI T R IQ +DWCPTGFKCGINYQP
Sbjct:  232 AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQP 359

HSP 2 Score: 124.79 bits (312), Expect = 2.673e-92
Identity = 62/92 (67.39%), Postives = 70/92 (76.09%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L ++AV             ERL  DYGKKSKL F  +PSPQVST+V EPYNSVLSTHSLLEHTDVA +LD+EAIYDIC ++LDIERPTYTNL
Sbjct:  136 LMFSAVGGGTGSGFGCLMLERLSVDYGKKSKLNFCCWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAIMLDNEAIYDICKKNLDIERPTYTNL 227

HSP 3 Score: 27.7202 bits (60), Expect = 2.673e-92
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCFT 85
            ++LADNCTGLQG   F+
Sbjct:  123 RKLADNCTGLQGFLMFS 139

HSP 4 Score: 21.9422 bits (45), Expect = 2.673e-92
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 1

Query:  748 PTVVPRGDLA 777
            PTVVP GDLA
Sbjct:  360 PTVVPGGDLA 369

HSP 5 Score: 21.1718 bits (43), Expect = 2.673e-92
Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3

Query:   12 VDLCLDRIR 38
            +D+CLDRIR
Sbjct:  115 IDVCLDRIR 123

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_TETTH (Tubulin alpha chain OS=Tetrahymena thermophila PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 7.359e-92
Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI SLTASL+ DGALNVD+TEF TNLVPYPRIHFMLSSYAP+ISA+KAYHEQLS AEITNSAFEP++MMAKCDPRHGKYMA  +MYRGDV P DVNA++ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 AQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 134.42 bits (337), Expect = 7.359e-92
Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L +N+V             ERL  DYGKKSKLGFT+YPSPQVST+V EPYNS+LSTHSLLEHTDVA +LD+EAIYDIC R+LDIERPTYTNL
Sbjct:  136 LVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 27.335 bits (59), Expect = 7.359e-92
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LADNCTGLQG   F
Sbjct:  123 RKLADNCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_TETPY (Tubulin alpha chain OS=Tetrahymena pyriformis PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 7.359e-92
Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI SLTASL+ DGALNVD+TEF TNLVPYPRIHFMLSSYAP+ISA+KAYHEQLS AEITNSAFEP++MMAKCDPRHGKYMA  +MYRGDV P DVNA++ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 AQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPANMMAKCDPRHGKYMACSMMYRGDVVPKDVNASIATIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 134.42 bits (337), Expect = 7.359e-92
Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L +N+V             ERL  DYGKKSKLGFT+YPSPQVST+V EPYNS+LSTHSLLEHTDVA +LD+EAIYDIC R+LDIERPTYTNL
Sbjct:  136 LVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 27.335 bits (59), Expect = 7.359e-92
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LADNCTGLQG   F
Sbjct:  123 RKLADNCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA3_MAIZE (Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.571e-92
Identity = 108/129 (83.72%), Postives = 114/129 (88.37%), Query Frame = 2

Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQ 745
            L SQVI SLTASL+ DGALNVDV EF TNLVPYPRIHFMLSSYAPVIS+ KA+HEQLS AEIT+SAFEP+SMM KCDPRHGKYMA CLMYRGDV P DVNAAVATI T R IQ +DWCPTGFKCGINYQ
Sbjct:  230 LVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISSAKAFHEQLSVAEITSSAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQ 358

HSP 2 Score: 132.88 bits (333), Expect = 8.571e-92
Identity = 67/92 (72.83%), Postives = 72/92 (78.26%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L +NAV             ERL  +YGKKSKLGFTVYPSPQVSTSV EPYNSVLSTHSLLEHTDV+ LLD+EAIYDIC RSLDIERP Y+NL
Sbjct:  136 LVFNAVGGGTGSGLGSLLLERLSVEYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPNYSNL 227

HSP 3 Score: 27.335 bits (59), Expect = 8.571e-92
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LADNCTGLQG   F
Sbjct:  123 RKLADNCTGLQGFLVF 138

HSP 4 Score: 21.1718 bits (43), Expect = 8.571e-92
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 1

Query:  745 APTVVPRGDLA 777
            APTVVP  DLA
Sbjct:  359 APTVVPGADLA 369

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_TOXGO (Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 9.588e-92
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI SLTASL+ DGALNVDVTEF TNLVPYPRIHFMLSSYAP+ISA+KAYHEQLS AEITNSAFEP+SMMAKCDPRHGKYMA CLMYRGDV P DVNAAVATI T R IQ +DWCPTGFKCGINYQP
Sbjct:  232 AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQP 359

HSP 2 Score: 127.872 bits (320), Expect = 9.588e-92
Identity = 64/92 (69.57%), Postives = 70/92 (76.09%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L +NAV             ERL  DYGKKSKL F  +PSPQVST+V EPYNSVLSTHSLLEHTDVA +LD+EAIYDIC R+LDIERPTYTNL
Sbjct:  136 LMFNAVGGGTGSGLGCLLLERLSVDYGKKSKLNFCSWPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 21.9422 bits (45), Expect = 9.588e-92
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 1

Query:  748 PTVVPRGDLA 777
            PTVVP GDLA
Sbjct:  360 PTVVPGGDLA 369

The following BLAST results are available for this feature:

BLAST of EY649579 vs. ExPASy Swiss-Prot

BLAST of EY649579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 399


Match Name	E-value	Identity	Description
TBA_AVESA	3.999e-93	82.03	Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 S...	[more]
TBA2_ANEPH	5.225e-93	83.85	Tubulin alpha-2 chain (Fragment) OS=Anemia phyllit...	[more]
TBA_EUPOC	5.534e-93	85.16	Tubulin alpha chain OS=Euplotes octocarinatus PE=3...	[more]
TBA2_STYLE	6.135e-93	86.72	Tubulin alpha-2 chain OS=Stylonychia lemnae PE=3 S...	[more]
TBA_PLAFK	1.216e-92	85.16	Tubulin alpha chain OS=Plasmodium falciparum (isol...	[more]
TBA_PLAYO	2.673e-92	85.16	Tubulin alpha chain OS=Plasmodium yoelii yoelii GN...	[more]
TBA_TETTH	7.359e-92	81.25	Tubulin alpha chain OS=Tetrahymena thermophila PE=...	[more]
TBA_TETPY	7.359e-92	81.25	Tubulin alpha chain OS=Tetrahymena pyriformis PE=3...	[more]
TBA3_MAIZE	8.571e-92	83.72	Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 PE=2 SV...	[more]
TBA_TOXGO	9.588e-92	86.72	Tubulin alpha chain OS=Toxoplasma gondii PE=3 SV=1	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-100-001-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649579 ID=EY649579; Name=EY649579; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGGTTGATCTCTGCCTTGACCGCATCAGGAGCTGGCTGATA
ACTGCACTGGTCTCCAGGGCATTCCTTGTTTTACAATGCTGTTGGTGGAG
GAACTGGCTCTGGTCTTGGGTCTCTTCTTCTGGAGAGGTTGCCTGCTGAC
TATGGAAAGAAGTCAAAGTTGGGCTTCACTGTCTACCCATCTCCTCAGGT
CTCCACTTCTGTTGCTGAGCCTTACAACAGTGTCCTCTCAACCCACTCCC
TGTTGGAGCATACTGATGTGGCTGCTCTTCTCGACAGTGAGGCCATTTAT
GACATCTGCTGGCGCTCCCTTGACATTGAACGTCCTACCTATACTAACCT
CATATATACTTGGTTCTCAGGTCATTCCTTCATTGACTGCCTCACTGAAG
CCTGATGGCGCTTTGAATGTGGATGTGACTGAATTCCCAACCAACTTGGT
CCCATACCCAAGAATCCACTTCATGCTTTCCTCCTATGCACCAGTCATCT
CAGCTGATAAAGCCTACCATGAACAACTCTCAGGTGCTGAGATCACCAAC
AGTGCCTTCGAGCCCTCATCTATGATGGCCAAATGTGATCCTCGGCATGG
CAAGTACATGGCTCGCTGCCTCATGTACCGAGGTGATGTTGAGCCCAACG
ATGTCAATGCAGCTGTTGCTACCATCAACACCAACCGTCTCATCCAATTA
CTGGACTGGTGCCCGACTGGGTTCAAGTGTGGTATCAACTACCAGCCCCA
ACTGTGGTTCCTCGTGGAGACCTTGCCACGTGCAAAGGGCTGATTGCATG
ATCTACACTCCCCCATGTGCATGAGTG