EY649579

Overview
NameEY649579
Unique NameEY649579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.915e-30
Identity = 35/124 (28.23%), Postives = 63/124 (50.81%), Query Frame = 2
Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            S  +  +T  L+  G LN D+ +   NL+P+PR+HF +  +AP+ S     +  L+  E+T   ++  +MM   DPRHG+Y+    M+RG +   +V+  +  +        ++W P   K  +
Sbjct:  230 STTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTIPELTQQMWDARNMMCAADPRHGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSV 353          

HSP 2 Score: 68.9366 bits (167), Expect = 8.915e-30
Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  136 RLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY---TNLIYTWFSG 372
            ++  +Y  +  L F+V+  P+ S +V EPYN+ LS H L+E+ D   +LD+EA+YDIC+R+L +  P++    +LI T  SG
Sbjct:  154 KIREEYPDRMMLTFSVFAVPEGSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSG 235          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVI (Tubulin beta-2 chain OS=Trichoderma viride GN=tub2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.915e-30
Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        ++  E+T   F+P +MMA  D R+G+Y+  C ++RG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSPGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCCSIFRGKVAMKEVEDQMRNVQNKNSTYFVEWIPNNIQTAL 353          

HSP 2 Score: 71.2478 bits (173), Expect = 8.915e-30
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNLIY 357
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P Y +L Y
Sbjct:  167 FSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLNNPAYGDLNY 227          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVE (Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.915e-30
Identity = 37/126 (29.37%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        ++  E+T   F+P +MMA  D R+G+Y+  C ++RG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSPGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCCSIFRGKVAMKEVEDQMRNVQNKNSTYFVEWIPNNIQTAL 353          

HSP 2 Score: 71.2478 bits (173), Expect = 8.915e-30
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNLIY 357
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P Y +L Y
Sbjct:  167 FSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPAYGDLNY 227          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.916e-30
Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   NL+P+PR+HF L  +AP+ S     +  L+  E+T   F+  +MMA  DP HG+Y+    M+RG +   +V+  +  +        ++W P   K  +
Sbjct:  225 LVSAVMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAASDPAHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSV 350          

HSP 2 Score: 65.0846 bits (157), Expect = 8.916e-30
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 1
Query:  136 RLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342
            ++  +Y  +  + F+V PSP+VS +V EPYN+ LS H L+E+ D    + +EA+YDIC  +L +  PT+
Sbjct:  152 KIREEYPDRMMMTFSVIPSPKVSDTVVEPYNTTLSVHQLVENADEVMCIGNEALYDICLPTLKLTTPTF 220          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB1_EMENI (Tubulin beta-1 chain OS=Emericella nidulans GN=benA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.161e-29
Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        +S  E+T   F+P +MMA  D R+G+Y+    ++RG V   +V   +  I +      ++W P   +  +
Sbjct:  228 LVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAYSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQSYFVEWIPNNIQTAL 353          

HSP 2 Score: 72.7886 bits (177), Expect = 1.161e-29
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            F+V PSP+VS +V EPYN+ LS H L+EH+D    +D+EA+YDIC R+L +  P+Y +L
Sbjct:  167 FSVVPSPKVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB1_ANEPH (Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.161e-29
Identity = 35/124 (28.23%), Postives = 63/124 (50.81%), Query Frame = 2
Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            S  +  +T  L+  G LN D+ +   NL+P+PR+HF +  +AP+ S     +  L+  E+T   ++  +MM   DPRHG+Y+    M+RG +   +V+  +  +        ++W P   K  +
Sbjct:  230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYXSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 353          

HSP 2 Score: 68.1662 bits (165), Expect = 1.161e-29
Identity = 32/85 (37.65%), Postives = 54/85 (63.53%), Query Frame = 1
Query:  136 RLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNLIYTWFSGHSFIDC 390
            ++  +Y  +  + F+V+ SP+VS +V EPYN+ LS H L+E+ D   +LD+EA+YDI  R+L +  PT+ +L +   +  S + C
Sbjct:  154 KIREEYPDRMMMTFSVFASPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIXLRTLKLVTPTFGDLNHLISATMSGVTC 238          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_PNECA (Tubulin beta chain OS=Pneumocystis carinii GN=TUB-B PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.161e-29
Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        L+  E+T   F+  +MMA  DPRHG+Y+    ++RG V   +V   + ++        ++W P   +  +
Sbjct:  228 LVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFIVGFAPLTSKGSHSFRSLTVPELTQQMFDAKNMMAASDPRHGRYLTVAAIFRGRVSMKEVEDQMHSVQQKNSSYFVEWIPNNVQTAL 353          

HSP 2 Score: 69.3218 bits (168), Expect = 1.161e-29
Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = 1
Query:  136 RLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ++  +Y  +    F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P Y +L
Sbjct:  154 KIREEYPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLPDPGYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_NEUCR (Tubulin beta chain OS=Neurospora crassa GN=tub-2 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.511e-29
Identity = 38/126 (30.16%), Postives = 66/126 (52.38%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T SL+  G LN D+ +   N+VP+PR+HF +  +AP+ S    +   +S  E+T   F+P +MMA  D R+G+Y+    ++RG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGVTVSLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHHFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTAL 353          

HSP 2 Score: 70.0922 bits (170), Expect = 1.511e-29
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P+Y +L
Sbjct:  167 FSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: YI016_HUMAN (Putative tubulin beta chain-like protein ENSP00000290377 OS=Homo sapiens PE=5 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.516e-29
Identity = 39/126 (30.95%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S  +  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S     +  L+ AE+T   F+  +M A  DPRHG+Y+    +++G +   +V+  +  I         DW P   K  I
Sbjct:  156 LVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMRAARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKNSSYFADWFPDNVKTAI 281          

HSP 2 Score: 68.5514 bits (166), Expect = 1.516e-29
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            F++ PSP+VS +V EPYN+ LS H L+E+ D    +D+EA+YDIC ++L +  PTY +L
Sbjct:   95 FSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDL 153          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_ASPFL (Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.968e-29
Identity = 38/126 (30.16%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        +S  E+T   F+P +MMA  D R+G+Y+    ++RG V   +V   +  I +      ++W P   +  +
Sbjct:  228 LVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIPNNIQTAL 353          

HSP 2 Score: 71.633 bits (174), Expect = 1.968e-29
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ++V PSP+VS +V EPYN+ LS H L+EH+D    +D+EA+YDIC R+L +  P+Y +L
Sbjct:  167 YSVVPSPKVSDTVVEPYNATLSVHQLVEHSDETFCIDNEALYDICMRTLKLSNPSYGDL 225          
The following BLAST results are available for this feature:
BLAST of EY649579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 399
Match NameE-valueIdentityDescription
TBB1_SOYBN8.915e-3028.23Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 ... [more]
TBB2_TRIVI8.915e-3029.37Tubulin beta-2 chain OS=Trichoderma viride GN=tub2... [more]
TBB2_TRIVE8.915e-3029.37Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV... [more]
TBB_EUGGR8.916e-3030.95Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=... [more]
TBB1_EMENI1.161e-2930.16Tubulin beta-1 chain OS=Emericella nidulans GN=ben... [more]
TBB1_ANEPH1.161e-2928.23Tubulin beta-1 chain OS=Anemia phyllitidis GN=TUBB... [more]
TBB_PNECA1.161e-2930.16Tubulin beta chain OS=Pneumocystis carinii GN=TUB-... [more]
TBB_NEUCR1.511e-2930.16Tubulin beta chain OS=Neurospora crassa GN=tub-2 P... [more]
YI016_HUMAN1.516e-2930.95Putative tubulin beta chain-like protein ENSP00000... [more]
TBB_ASPFL1.968e-2930.16Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649579 ID=EY649579; Name=EY649579; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGGTTGATCTCTGCCTTGACCGCATCAGGAGCTGGCTGATA
ACTGCACTGGTCTCCAGGGCATTCCTTGTTTTACAATGCTGTTGGTGGAG
GAACTGGCTCTGGTCTTGGGTCTCTTCTTCTGGAGAGGTTGCCTGCTGAC
TATGGAAAGAAGTCAAAGTTGGGCTTCACTGTCTACCCATCTCCTCAGGT
CTCCACTTCTGTTGCTGAGCCTTACAACAGTGTCCTCTCAACCCACTCCC
TGTTGGAGCATACTGATGTGGCTGCTCTTCTCGACAGTGAGGCCATTTAT
GACATCTGCTGGCGCTCCCTTGACATTGAACGTCCTACCTATACTAACCT
CATATATACTTGGTTCTCAGGTCATTCCTTCATTGACTGCCTCACTGAAG
CCTGATGGCGCTTTGAATGTGGATGTGACTGAATTCCCAACCAACTTGGT
CCCATACCCAAGAATCCACTTCATGCTTTCCTCCTATGCACCAGTCATCT
CAGCTGATAAAGCCTACCATGAACAACTCTCAGGTGCTGAGATCACCAAC
AGTGCCTTCGAGCCCTCATCTATGATGGCCAAATGTGATCCTCGGCATGG
CAAGTACATGGCTCGCTGCCTCATGTACCGAGGTGATGTTGAGCCCAACG
ATGTCAATGCAGCTGTTGCTACCATCAACACCAACCGTCTCATCCAATTA
CTGGACTGGTGCCCGACTGGGTTCAAGTGTGGTATCAACTACCAGCCCCA
ACTGTGGTTCCTCGTGGAGACCTTGCCACGTGCAAAGGGCTGATTGCATG
ATCTACACTCCCCCATGTGCATGAGTG
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