EY649579

Overview
NameEY649579
Unique NameEY649579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_PLESA (Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.968e-29
Identity = 34/117 (29.06%), Postives = 60/117 (51.28%), Query Frame = 2
Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCP 715
            S V+  +T  L+  G LN D+ +   N+VP+PR+HF +    P+ +     +  ++  E+T   F+  +MMA  DPRHG+Y+    ++RG V   +V   +  +        ++W P
Sbjct:  230 SIVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMPGVCPLTARGSQQYRAVTVPELTQQMFDAKNMMAASDPRHGRYLTVAAVFRGKVSMKEVEEQMQNVQNKNSAYFVEWIP 346          

HSP 2 Score: 72.0182 bits (175), Expect = 1.968e-29
Identity = 31/72 (43.06%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  136 RLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ++  +Y  +    ++V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC+R+L +  PTY +L
Sbjct:  154 KIREEYPDRMMCTYSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLTTPTYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB1_GEOCN (Tubulin beta-1 chain OS=Geotrichum candidum PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.562e-29
Identity = 38/126 (30.16%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   NLVP+PR+HF +  YAP+ +  +     L+  E+T   F+  +MMA  DP+ G+Y+     +RG V   +V   + ++        ++W P   +  I
Sbjct:  228 LVSGVMSGITTCLRFPGQLNSDLRKLAVNLVPFPRLHFFMVGYAPLSAPGQQSFRSLTVPELTQQLFDSKNMMAASDPKRGRYLTVAAFFRGKVSIKEVEDQMRSVQERNSAYFVEWIPNNVQTAI 353          

HSP 2 Score: 70.0922 bits (170), Expect = 2.562e-29
Identity = 29/72 (40.28%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  136 RLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ++  +Y  +    F+V PSP+VS ++ EPYN+ LS H L+E+ D    +D+EA+YDIC  +L +++PT+ +L
Sbjct:  154 KIREEYPDRMMATFSVVPSPKVSDTIVEPYNATLSVHQLIENADETFCIDNEALYDICQHTLKLKQPTHADL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_MYCGR (Tubulin beta chain OS=Mycosphaerella graminicola GN=TUB1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.562e-29
Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        ++  E+T   F+P +MMA  D R+G+Y+    +YRG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQIFDPKNMMAASDFRNGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVQTAL 353          

HSP 2 Score: 70.8626 bits (172), Expect = 2.562e-29
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P+Y +L
Sbjct:  167 FSVMPSPKVSDTVVEPYNATLSVHQLVENSDATFCIDNEALYDICMRTLKLNNPSYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_CERBT (Tubulin beta chain OS=Cercospora beticola GN=TUB1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.562e-29
Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        ++  E+T   F+P +MMA  D R+G+Y+    +YRG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQIFDPKNMMAASDFRNGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVQTAL 353          

HSP 2 Score: 70.8626 bits (172), Expect = 2.562e-29
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P+Y +L
Sbjct:  167 FSVMPSPKVSDTVVEPYNATLSVHQLVENSDATFCIDNEALYDICMRTLKLNNPSYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_ENCIN (Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.563e-29
Identity = 35/126 (27.78%), Postives = 67/126 (53.17%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN  + +   N++P+PR+HF +  +AP+ +      +  S +E+T   F+  +MM  CDP+ G+Y+    M+RG +   DV+  ++ + +      ++W P+  K  +
Sbjct:  228 LVSLVMSGVTTCLRFPGQLNAYLRKLAVNMIPFPRLHFFVVGFAPLTAVGTQKFKTYSVSELTQQMFDSKNMMTACDPKKGRYLTVAAMFRGKISMKDVDEQMSMVQSKNSSLFVEWIPSNVKTAV 353          

HSP 2 Score: 68.5514 bits (166), Expect = 2.563e-29
Identity = 30/72 (41.67%), Postives = 48/72 (66.67%), Query Frame = 1
Query:  136 RLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ++  D+  +    F+V PSP+VS +V EPYN+ LS H L+E+ D    +D+EA+YD+C+R+L +  P Y +L
Sbjct:  154 KIREDFPDRMICTFSVVPSPKVSDTVVEPYNATLSIHQLVENADETFCIDNEALYDMCFRTLKLNNPGYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_MYCPJ (Tubulin beta chain OS=Mycosphaerella pini GN=TUB1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.343e-29
Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        ++  E+T   F+P +MMA  D R+G+Y+    +YRG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQIFDPKNMMAASDFRNGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVQTAL 353          

HSP 2 Score: 70.0922 bits (170), Expect = 4.343e-29
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P+Y +L
Sbjct:  167 FSVMPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLNNPSYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_USTMA (Tubulin beta chain OS=Ustilago maydis GN=UM05828 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.343e-29
Identity = 37/119 (31.09%), Postives = 62/119 (52.10%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCP 715
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  ++P+ +     +  ++  EIT  AF+  +MM  CD R G+Y+     +RG V   DV   + +       Q ++W P
Sbjct:  228 LVSLVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFSPLTARGSQSYRAVTIPEITQQAFDSKNMMTACDTRLGRYLTCAAYFRGKVSMKDVEDQMQSFQQKHSTQFVEWIP 346          

HSP 2 Score: 70.4774 bits (171), Expect = 4.343e-29
Identity = 30/72 (41.67%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  136 RLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ++  +Y  +    F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+Y+IC+++L +  PTY +L
Sbjct:  154 KIREEYPDRMMATFSVLPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYNICFKTLKLNAPTYGDL 225          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_METAN (Tubulin beta chain OS=Metarhizium anisopliae PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.654e-29
Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        +S  E+T   F+P +MMA  D R+G+Y+    ++RG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTAL 353          

HSP 2 Score: 71.633 bits (174), Expect = 5.654e-29
Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNLIY 357
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P+Y +L Y
Sbjct:  167 FSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNY 227          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_EPITY (Tubulin beta chain OS=Epichloe typhina GN=TUBB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.654e-29
Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        +S  E+T   F+P +MMA  D R+G+Y+    ++RG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTAL 353          

HSP 2 Score: 71.633 bits (174), Expect = 5.654e-29
Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNLIY 357
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P+Y +L Y
Sbjct:  167 FSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNY 227          
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBB_ACRCO (Tubulin beta chain OS=Acremonium coenophialum GN=TUB2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.654e-29
Identity = 37/126 (29.37%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736
            L S V+  +T  L+  G LN D+ +   N+VP+PR+HF +  +AP+ S        +S  E+T   F+P +MMA  D R+G+Y+    ++RG V   +V   +  +        ++W P   +  +
Sbjct:  228 LVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTAL 353          

HSP 2 Score: 71.633 bits (174), Expect = 5.654e-29
Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 1
Query:  175 FTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNLIY 357
            F+V PSP+VS +V EPYN+ LS H L+E++D    +D+EA+YDIC R+L +  P+Y +L Y
Sbjct:  167 FSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNY 227          
The following BLAST results are available for this feature:
BLAST of EY649579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 399
Match NameE-valueIdentityDescription
TBB_PLESA1.968e-2929.06Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV... [more]
TBB1_GEOCN2.562e-2930.16Tubulin beta-1 chain OS=Geotrichum candidum PE=3 S... [more]
TBB_MYCGR2.562e-2929.37Tubulin beta chain OS=Mycosphaerella graminicola G... [more]
TBB_CERBT2.562e-2929.37Tubulin beta chain OS=Cercospora beticola GN=TUB1 ... [more]
TBB_ENCIN2.563e-2927.78Tubulin beta chain OS=Encephalitozoon intestinalis... [more]
TBB_MYCPJ4.343e-2929.37Tubulin beta chain OS=Mycosphaerella pini GN=TUB1 ... [more]
TBB_USTMA4.343e-2931.09Tubulin beta chain OS=Ustilago maydis GN=UM05828 P... [more]
TBB_METAN5.654e-2929.37Tubulin beta chain OS=Metarhizium anisopliae PE=3 ... [more]
TBB_EPITY5.654e-2929.37Tubulin beta chain OS=Epichloe typhina GN=TUBB PE=... [more]
TBB_ACRCO5.654e-2929.37Tubulin beta chain OS=Acremonium coenophialum GN=T... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649579 ID=EY649579; Name=EY649579; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGGTTGATCTCTGCCTTGACCGCATCAGGAGCTGGCTGATA
ACTGCACTGGTCTCCAGGGCATTCCTTGTTTTACAATGCTGTTGGTGGAG
GAACTGGCTCTGGTCTTGGGTCTCTTCTTCTGGAGAGGTTGCCTGCTGAC
TATGGAAAGAAGTCAAAGTTGGGCTTCACTGTCTACCCATCTCCTCAGGT
CTCCACTTCTGTTGCTGAGCCTTACAACAGTGTCCTCTCAACCCACTCCC
TGTTGGAGCATACTGATGTGGCTGCTCTTCTCGACAGTGAGGCCATTTAT
GACATCTGCTGGCGCTCCCTTGACATTGAACGTCCTACCTATACTAACCT
CATATATACTTGGTTCTCAGGTCATTCCTTCATTGACTGCCTCACTGAAG
CCTGATGGCGCTTTGAATGTGGATGTGACTGAATTCCCAACCAACTTGGT
CCCATACCCAAGAATCCACTTCATGCTTTCCTCCTATGCACCAGTCATCT
CAGCTGATAAAGCCTACCATGAACAACTCTCAGGTGCTGAGATCACCAAC
AGTGCCTTCGAGCCCTCATCTATGATGGCCAAATGTGATCCTCGGCATGG
CAAGTACATGGCTCGCTGCCTCATGTACCGAGGTGATGTTGAGCCCAACG
ATGTCAATGCAGCTGTTGCTACCATCAACACCAACCGTCTCATCCAATTA
CTGGACTGGTGCCCGACTGGGTTCAAGTGTGGTATCAACTACCAGCCCCA
ACTGTGGTTCCTCGTGGAGACCTTGCCACGTGCAAAGGGCTGATTGCATG
ATCTACACTCCCCCATGTGCATGAGTG
back to top