EY649579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 1.131e-13 Identity = 31/127 (24.41%), Postives = 65/127 (51.18%), Query Frame = 2 Query: 365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYH--EQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGIN 739 S V+ + T +L+ G +N D+ +LVP PR HF+++ Y P +S D+ ++ + + ++ + ++M + G YM+ + +GDV+P V+ ++ I +L + W P + ++ Sbjct: 230 STVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTP-LSLDQKFNSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 355 HSP 2 Score: 38.891 bits (89), Expect = 1.131e-13 Identity = 24/73 (32.88%), Postives = 38/73 (52.05%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351 ERL Y KK ++V+P + V +PYN +LS L + D +LD+ A+ I L I +PT++ + Sbjct: 155 ERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQI 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 1.470e-13 Identity = 27/122 (22.13%), Postives = 61/122 (50.00%), Query Frame = 2 Query: 365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPV-ISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFK 727 S V+ + T +L+ G++N D+ ++L+ P+ HF+++SY P+ I + ++ + ++ ++M R G Y++ + RG+ +P V+ + I +L+ + W P + Sbjct: 234 SNVMSASTTTLRYPGSMNNDMISLISSLIINPKCHFLITSYTPITIDKHISNVQKTTVLDVMKRLLHTKNIMVSAPVRRGMYISILNIIRGETDPTQVHKGLQRIRDRKLVNFIKWNPASIQ 355 HSP 2 Score: 40.817 bits (94), Expect = 1.470e-13 Identity = 26/78 (33.33%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYP--SPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY--TNLI 354 E L +Y KK F+V+P + + S V +PYNS+L+ L+ TD ++D+ ++ I L + PT+ TN I Sbjct: 155 ELLNDNYSKKMIQTFSVFPLLTNESSDVVVQPYNSILTLKRLILSTDSVVVIDNTSLNRIFVERLKLNNPTFQQTNTI 232
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 1.907e-13 Identity = 33/136 (24.26%), Postives = 63/136 (46.32%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYH----EQLSGAEITNSAFEPSS---MMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQ 745 L S V+ + T +L+ G +N D+ +L+P PR HF+ +SY P ++DK + + ++ +P + M RH Y++ + +G+V+P DV+ ++ I + W P + + Q Sbjct: 230 LVSTVMSASTQTLRYPGYMNNDLVGMIASLIPTPRCHFLTTSYTP-FTSDKIEQAKAVRKTTVLDVMRRLLQPKNRLVSMPTTPSRHACYISILNIIQGEVDPTDVHKSLLRIRERNSATFIPWGPASIQVALTKQ 364 HSP 2 Score: 44.669 bits (104), Expect = 1.907e-13 Identity = 23/66 (34.85%), Postives = 34/66 (51.52%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIE 330 ER+ Y KK ++V+P V +PYNS+LS L H D +LD+ A+ IC L ++ Sbjct: 155 ERMNDRYPKKLIQTYSVFPDADSGDVVVQPYNSLLSMKRLTNHADSVIVLDNAALSKICQDRLHVQ 220
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.908e-13 Identity = 32/126 (25.40%), Postives = 63/126 (50.00%), Query Frame = 2 Query: 365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYH--EQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736 S V+ + T +L+ G +N D+ +LVP PR HF+++ Y P +S D+ Y + + ++ + ++M + G YM+ + +GDV+P V+ ++ I +L + W P + + Sbjct: 230 STVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTP-LSLDQKYTSVRKTTFLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIKERKLANFIPWGPASIQVAL 354 HSP 2 Score: 38.1206 bits (87), Expect = 1.908e-13 Identity = 23/73 (31.51%), Postives = 38/73 (52.05%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351 ER+ Y KK ++V+P + V +PYN +LS L + D +LD+ A+ I L I +PT++ + Sbjct: 155 ERINDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQI 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.478e-13 Identity = 31/127 (24.41%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYH--EQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGIN 739 S V+ + T +L+ G +N D+ +LVP PR HF+++ Y P +S D+ + + + ++ + ++M + G YM+ + +GDV+P V+ ++ I +L + W P + ++ Sbjct: 230 STVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTP-LSLDQKFTSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIRERKLANFIPWGPASIQVALS 355 HSP 2 Score: 38.891 bits (89), Expect = 2.478e-13 Identity = 24/73 (32.88%), Postives = 38/73 (52.05%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351 ERL Y KK ++V+P + V +PYN +LS L + D +LD+ A+ I L I +PT++ + Sbjct: 155 ERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQI 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 2.479e-13 Identity = 32/130 (24.62%), Postives = 65/130 (50.00%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVI--SADKAYH-EQLSGAEITNSAFEPSSMMAKCDP-RHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736 L S V+ + T +L+ G ++ D+ +L+P PR HF+L+SY P + D+A + + ++ +P + M +P + Y++ + +G+ +P DV+ ++ I RL + W P + + Sbjct: 230 LVSTVMSASTTTLRYPGYMHNDLVGIIASLIPTPRSHFLLTSYTPFTGDNIDQAKTVRKTTVLDVMRRLLQPKNRMVSINPSKSSCYISILNIIQGEADPTDVHKSLLRIRERRLASFIPWGPASIQVAL 359 HSP 2 Score: 42.743 bits (99), Expect = 2.479e-13 Identity = 21/70 (30.00%), Postives = 38/70 (54.29%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 ER+ + KK ++V+P Q + V PYNS+L+ L ++ D +LD+ A+ I L ++ P++ Sbjct: 155 ERMNDRFPKKLIQTYSVFPDTQAADVVVNPYNSLLAMRRLTQNADSVVVLDNAALSRIVADRLHVQEPSF 224
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG3_MAIZE (Tubulin gamma-3 chain (Fragment) OS=Zea mays GN=TUBG3 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.484e-13 Identity = 33/150 (22.00%), Postives = 70/150 (46.67%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPV-ISADKAYHEQLSGAEITNSAFEPSSMMAKCDPR-----HGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQPQLWFLVETLPRAKG 790 L S V+ + T +L+ G +N D+ +L+P PR HF+++ Y P+ + + + ++ + ++M R KY++ + +G+V+P V+ ++ I +L+ +DW P + ++ + V+T R G Sbjct: 183 LVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAPASIQVALSRKSP---YVQTTHRVSG 329 HSP 2 Score: 41.2022 bits (95), Expect = 2.484e-13 Identity = 26/72 (36.11%), Postives = 39/72 (54.17%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQVSTS--VAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 E L Y KK ++V+P+ QV TS V +PYNS+L+ L + D +LD+ A+ I L + PT+ Sbjct: 107 ETLNDRYSKKLVQTYSVFPN-QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTF 177
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG2_MAIZE (Tubulin gamma-2 chain OS=Zea mays GN=TUBG2 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 5.427e-13 Identity = 33/150 (22.00%), Postives = 70/150 (46.67%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPV-ISADKAYHEQLSGAEITNSAFEPSSMMAKCDPR-----HGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQPQLWFLVETLPRAKG 790 L S V+ + T +L+ G +N D+ +L+P PR HF+++ Y P+ + + + ++ + ++M R KY++ + +G+V+P V+ ++ I +L+ +DW P + ++ + V+T R G Sbjct: 231 LVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNVMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWAPASIQVALSRKSP---YVQTTHRVSG 377 HSP 2 Score: 40.0466 bits (92), Expect = 5.427e-13 Identity = 23/71 (32.39%), Postives = 37/71 (52.11%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSP-QVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 E L Y KK ++V+P+ + S V +PYNS+L+ L + D +LD+ A+ I L + PT+ Sbjct: 155 ETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTF 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.136e-13 Identity = 42/157 (26.75%), Postives = 84/157 (53.50%), Query Frame = 2 Query: 275 LFSTVRP---FMTSAGAPLTLNVLPILTSYILGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736 L +TV+P +S+GA + P + + ++ +LT+S + +G+LN+D+ E NLVP+P++H+++SS P+ + ++ + AF + + DP+H Y+A LM RG+V+ +D+ + + + +Q + W G+K + Sbjct: 230 LGTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDLRRNIERLKPS--LQFVSWNQEGWKTSL 384
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 1.188e-12 Identity = 29/133 (21.80%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPV-ISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRH-----GKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGIN 739 L S V+ + T +L+ G +N D+ +L+P PR HF+++ Y P+ + + + ++ + ++M R+ KY++ + +G+V+P V+ ++ I +L+ +DW P + ++ Sbjct: 231 LVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALS 363 HSP 2 Score: 39.6614 bits (91), Expect = 1.188e-12 Identity = 23/71 (32.39%), Postives = 37/71 (52.11%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSP-QVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 E L Y KK ++V+P+ + S V +PYNS+L+ L + D +LD+ A+ I L + PT+ Sbjct: 155 ETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTF 225 The following BLAST results are available for this feature:
BLAST of EY649579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 399
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649579 ID=EY649579; Name=EY649579; organism=Citrus sinensis; type=EST; length=827bpback to top |