EY649579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 47.3654 bits (111), Expect = 1.545e-12 Identity = 28/131 (21.37%), Postives = 64/131 (48.85%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVIS--ADKAYHEQLSGAEITNSAFEPSSMM--AKCDPRHGKYMARCL-MYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736 L S ++ T +L+ +N ++ +L+P P++HF+++ Y P++S K + + ++ +P +MM A D + + L + +G+V+P+ V+ ++ I +L + W P + + Sbjct: 231 LVSTIMSLSTTTLRYPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVAL 361 HSP 2 Score: 46.595 bits (109), Expect = 1.545e-12 Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSP-QVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYT---NLIYTWFS 369 ERL + KK ++V+P+ ++S V +PYNS+L+ L + D +LD+ A+ I L I+ PT+T NL+ T S Sbjct: 155 ERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMS 237
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 1.546e-12 Identity = 31/132 (23.48%), Postives = 63/132 (47.73%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPV----ISADKAYHEQLSGAEITNSAFEPSSMMAKCDP-RHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGIN 739 L S V+ + T +L+ G +N D+ +L+P PR HF+L+SY P + KA + + ++ P + M +P + +++ + +G+ +P DV+ ++ I R + W P + ++ Sbjct: 231 LVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAI-RKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALS 361 HSP 2 Score: 42.743 bits (99), Expect = 1.546e-12 Identity = 26/71 (36.62%), Postives = 39/71 (54.93%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQ-VSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 ERL Y KK ++V+P+ Q VS V +PYNS+L+ L + D +LD+ A+ I L + PT+ Sbjct: 155 ERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTF 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 2.603e-12 Identity = 32/150 (21.33%), Postives = 69/150 (46.00%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPV-ISADKAYHEQLSGAEITNSAFEPSSMMAKCDPR-----HGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQPQLWFLVETLPRAKG 790 L S V+ + T +L+ G +N D+ +L+P PR HF+++ Y P+ + + + ++ + ++M R KY++ + +G+V+P V+ ++ I +L+ + W P + ++ + V+T R G Sbjct: 231 LVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIYWAPASIQVALSRKSP---YVQTTHRVSG 377 HSP 2 Score: 41.2022 bits (95), Expect = 2.603e-12 Identity = 26/72 (36.11%), Postives = 39/72 (54.17%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQVSTS--VAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 E L Y KK ++V+P+ QV TS V +PYNS+L+ L + D +LD+ A+ I L + PT+ Sbjct: 155 ETLNDRYSKKLVQTYSVFPN-QVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTF 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.604e-12 Identity = 29/127 (22.83%), Postives = 61/127 (48.03%), Query Frame = 2 Query: 365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYH--EQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGIN 739 S V+ + T +L+ G +N D+ +LVP PR HF+++ Y P+ D+ + + ++ + ++M + G YM+ + +GDV+P V+ ++ I + + W P + ++ Sbjct: 230 STVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLNDQKVSSIRKTTVLDVMRRLLQTRNIMTSGAIKKGAYMSILNIIQGDVDPTQVHKSLQRIRERNVANFIPWGPASIQVALS 356 HSP 2 Score: 38.1206 bits (87), Expect = 2.604e-12 Identity = 23/73 (31.51%), Postives = 38/73 (52.05%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351 E+L Y KK ++V+P+ + V +PYN +LS L+ + D +LD+ AI I L + PT + + Sbjct: 155 EKLNDHYPKKLVQTYSVFPND--NDIVVQPYNCILSMKRLVLNADCVVVLDNTAITSIAVDRLKLLHPTISQV 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 3.378e-12 Identity = 32/150 (21.33%), Postives = 71/150 (47.33%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPV-ISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRH-----GKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQPQLWFLVETLPRAKG 790 L S V+ + T +L+ G +N D+ +L+P PR HF+++ Y P+ + + + ++ + ++M R+ KY++ + +G+V+P V+ ++ I +L+ ++W P + ++ + V+T R G Sbjct: 231 LVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSP---YVQTAHRVSG 377 HSP 2 Score: 39.2762 bits (90), Expect = 3.378e-12 Identity = 23/71 (32.39%), Postives = 37/71 (52.11%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSP-QVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 E L Y KK ++V+P+ + S V +PYNS+L+ L + D +LD+ A+ I L + PT+ Sbjct: 155 ETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTF 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 3.379e-12 Identity = 32/150 (21.33%), Postives = 71/150 (47.33%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPV-ISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRH-----GKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQPQLWFLVETLPRAKG 790 L S V+ + T +L+ G +N D+ +L+P PR HF+++ Y P+ + + + ++ + ++M R+ KY++ + +G+V+P V+ ++ I +L+ ++W P + ++ + V+T R G Sbjct: 231 LVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSP---YVQTTHRVSG 377 HSP 2 Score: 39.6614 bits (91), Expect = 3.379e-12 Identity = 23/71 (32.39%), Postives = 37/71 (52.11%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSP-QVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 E L Y KK ++V+P+ + S V +PYNS+L+ L + D +LD+ A+ I L + PT+ Sbjct: 155 ETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTF 225
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 4.388e-12 Identity = 31/150 (20.67%), Postives = 71/150 (47.33%), Query Frame = 2 Query: 371 VIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYH-----EQLSGAEITNSAFEPSSMMAKC-----DPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQPQLWFLVETLPRAKG 790 V+ + T +L+ G +N D+ +L+P PR HF+++ Y P+ + + A + + ++ +P ++M D + KY++ + +G+V+P+ V+ ++ I + ++W P + ++ + V+T R G Sbjct: 235 VMAASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTAENAAGQVTSNIRKTTVLDVMRRLLQPKNIMVSTHTKSRDIANAKYISILNIIQGEVDPSQVHKSLQRIRERKQANFIEWGPASIQVALSKKSP---YVQTAHRVSG 381 HSP 2 Score: 39.6614 bits (91), Expect = 4.388e-12 Identity = 21/63 (33.33%), Postives = 34/63 (53.97%), Query Frame = 1 Query: 151 YGKKSKLGFTVYPSPQVSTSVA-EPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERP 336 Y KK ++V+P+ S+ V +PYNS+L+ L H D +LD+ A+ I L + +P Sbjct: 161 YSKKLIQTYSVFPNQSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERLHLHKP 223
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.534e-12 Identity = 35/124 (28.23%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGI 736 + ++ SLT+S + +G+LN+D+ E NLVP+P++H+++SS P+ + ++ + AF + + DPRH Y+A L+ RG+V+ +D+ + + +Q + W G+K + Sbjct: 263 ANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPLYTLADVNIPPRRLDQMFSDAFSKDHQLIQADPRHSLYLACALIVRGNVQISDLRRNIERLKP--ALQFVSWNQEGWKTSL 384
BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBG_PHYPA (Tubulin gamma chain OS=Physcomitrella patens GN=TUBG1 PE=3 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 7.394e-12 Identity = 33/150 (22.00%), Postives = 70/150 (46.67%), Query Frame = 2 Query: 359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYH-EQLSGAEITNSAFEPSSMMAKCDPR-----HGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQPQLWFLVETLPRAKG 790 L S V+ + T +L+ G +N D+ +L+P PR HF+++ Y P+ +A + + ++ + ++M R KY++ + +G+V+P V+ ++ I +L ++W P + ++ + V+T R G Sbjct: 231 LVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQANAIRKTTVLDVMRRLLQAKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQVALSRKSP---YVQTAHRVSG 377 HSP 2 Score: 39.6614 bits (91), Expect = 7.394e-12 Identity = 24/71 (33.80%), Postives = 37/71 (52.11%), Query Frame = 1 Query: 133 ERLPADYGKKSKLGFTVYPSP-QVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTY 342 E L Y KK ++V+P+ + S V +PYNS+L+ L + D +LD+ A+ I L I PT+ Sbjct: 155 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLHIPNPTF 225 The following BLAST results are available for this feature:
BLAST of EY649579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 399
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649579 ID=EY649579; Name=EY649579; organism=Citrus sinensis; type=EST; length=827bpback to top |