EY649579 | Citrus Genome Database

Overview


Name	EY649579
Unique Name	EY649579
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	827

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7838	contig	Csv1_Contig7838:430..1253.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1A_RAT (Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.807e-83
Identity = 97/127 (76.38%), Postives = 111/127 (87.40%), Query Frame = 2

Query:  368 QVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            Q++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 1.807e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 1.807e-83
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1A_PANTR (Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1A PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.807e-83
Identity = 97/127 (76.38%), Postives = 111/127 (87.40%), Query Frame = 2

Query:  368 QVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            Q++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 1.807e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 1.807e-83
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1A_MOUSE (Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.807e-83
Identity = 97/127 (76.38%), Postives = 111/127 (87.40%), Query Frame = 2

Query:  368 QVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            Q++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 1.807e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 1.807e-83
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1A_HUMAN (Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.807e-83
Identity = 97/127 (76.38%), Postives = 111/127 (87.40%), Query Frame = 2

Query:  368 QVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            Q++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 1.807e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 1.807e-83
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1A_CRIGR (Tubulin alpha-1A chain OS=Cricetulus griseus GN=TUBA1A PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.807e-83
Identity = 97/127 (76.38%), Postives = 111/127 (87.40%), Query Frame = 2

Query:  368 QVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            Q++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 1.807e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 1.807e-83
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_XENLA (Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 5.207e-83
Identity = 96/128 (75.00%), Postives = 112/128 (87.50%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQL+ A+ITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.087 bits (292), Expect = 5.207e-83
Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F +YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 5.207e-83
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA_XENTR (Tubulin alpha chain OS=Xenopus tropicalis GN=tuba PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 5.207e-83
Identity = 96/128 (75.00%), Postives = 111/128 (86.72%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS +EITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+A I T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 5.207e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 5.207e-83
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA4A_RAT (Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tuba4a PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 6.784e-83
Identity = 97/128 (75.78%), Postives = 111/128 (86.72%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+A I T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 6.784e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 23.8682 bits (50), Expect = 6.784e-83
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++L+D CTGLQG   F
Sbjct:  123 RKLSDQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA4A_MOUSE (Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 6.784e-83
Identity = 97/128 (75.78%), Postives = 111/128 (86.72%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+A I T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 6.784e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 23.8682 bits (50), Expect = 6.784e-83
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++L+D CTGLQG   F
Sbjct:  123 RKLSDQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 6.784e-83
Identity = 97/128 (75.78%), Postives = 111/128 (86.72%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+A I T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 6.784e-83
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 23.8682 bits (50), Expect = 6.784e-83
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++L+D CTGLQG   F
Sbjct:  123 RKLSDQCTGLQGFLVF 138

The following BLAST results are available for this feature:

BLAST of EY649579 vs. ExPASy Swiss-Prot

BLAST of EY649579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 399


Match Name	E-value	Identity	Description
TBA1A_RAT	1.807e-83	76.38	Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tub...	[more]
TBA1A_PANTR	1.807e-83	76.38	Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1...	[more]
TBA1A_MOUSE	1.807e-83	76.38	Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a P...	[more]
TBA1A_HUMAN	1.807e-83	76.38	Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A P...	[more]
TBA1A_CRIGR	1.807e-83	76.38	Tubulin alpha-1A chain OS=Cricetulus griseus GN=TU...	[more]
TBA_XENLA	5.207e-83	75.00	Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2...	[more]
TBA_XENTR	5.207e-83	75.00	Tubulin alpha chain OS=Xenopus tropicalis GN=tuba ...	[more]
TBA4A_RAT	6.784e-83	75.78	Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tub...	[more]
TBA4A_MOUSE	6.784e-83	75.78	Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a P...	[more]
TBA4A_MACFA	6.784e-83	75.78	Tubulin alpha-4A chain OS=Macaca fascicularis GN=T...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-001-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649579 ID=EY649579; Name=EY649579; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGGTTGATCTCTGCCTTGACCGCATCAGGAGCTGGCTGATA
ACTGCACTGGTCTCCAGGGCATTCCTTGTTTTACAATGCTGTTGGTGGAG
GAACTGGCTCTGGTCTTGGGTCTCTTCTTCTGGAGAGGTTGCCTGCTGAC
TATGGAAAGAAGTCAAAGTTGGGCTTCACTGTCTACCCATCTCCTCAGGT
CTCCACTTCTGTTGCTGAGCCTTACAACAGTGTCCTCTCAACCCACTCCC
TGTTGGAGCATACTGATGTGGCTGCTCTTCTCGACAGTGAGGCCATTTAT
GACATCTGCTGGCGCTCCCTTGACATTGAACGTCCTACCTATACTAACCT
CATATATACTTGGTTCTCAGGTCATTCCTTCATTGACTGCCTCACTGAAG
CCTGATGGCGCTTTGAATGTGGATGTGACTGAATTCCCAACCAACTTGGT
CCCATACCCAAGAATCCACTTCATGCTTTCCTCCTATGCACCAGTCATCT
CAGCTGATAAAGCCTACCATGAACAACTCTCAGGTGCTGAGATCACCAAC
AGTGCCTTCGAGCCCTCATCTATGATGGCCAAATGTGATCCTCGGCATGG
CAAGTACATGGCTCGCTGCCTCATGTACCGAGGTGATGTTGAGCCCAACG
ATGTCAATGCAGCTGTTGCTACCATCAACACCAACCGTCTCATCCAATTA
CTGGACTGGTGCCCGACTGGGTTCAAGTGTGGTATCAACTACCAGCCCCA
ACTGTGGTTCCTCGTGGAGACCTTGCCACGTGCAAAGGGCTGATTGCATG
ATCTACACTCCCCCATGTGCATGAGTG