FC921798

Overview
NameFC921798
Unique NameFC921798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.918e-43
Identity = 75/112 (66.96%), Postives = 96/112 (85.71%), Query Frame = 3
Query:   93 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            +FPVI++ N+NG  R ++L +IN+ACENWGFFELVNHGI  E MD VE+LTK HYRKCMEQRFKE+VAS+ L+ ++TE+ND DWESTF++RHLP S ++E+ DLDEEY+KVM
Sbjct:    4 DFPVINMNNLNGESRVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEMVASKGLDSVETEINDTDWESTFFLRHLPVSNMSEIGDLDEEYKKVM 115          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.504e-43
Identity = 75/114 (65.79%), Postives = 97/114 (85.09%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            M  FPV+ L  +NG ERAA LEKIN+ACENWGFFELVNHG+  E +DTVE++TK HY+K MEQRFKE+VA++ L+ +Q+E++D+DWESTF++RHLP S I+E+PDL+EEYRK M
Sbjct:    1 MATFPVVDLSLVNGEERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEMVAAKGLDDVQSEIHDLDWESTFFLRHLPSSNISEIPDLEEEYRKTM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.769e-42
Identity = 74/114 (64.91%), Postives = 96/114 (84.21%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            M  FPV+ ++ ING ERAA LEKIN+ACENWGFFELVNHGI  E +DTVE++ K HY+K MEQRFKE+VA++ LE +Q+E++ +DWESTF++RHLP S I+E+PDL+E+YRK M
Sbjct:    1 MATFPVVDMDLINGEERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPSSNISEIPDLEEDYRKTM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.723e-42
Identity = 72/114 (63.16%), Postives = 97/114 (85.09%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            MENFP++ +  +N  +R + +E I +ACENWGFFE VNHGI  E MDTVE+LTK HY+KCMEQRFKE+VA++ LE +Q+E++D+DWESTF++RHLP S+I+E+PDLD++YRKVM
Sbjct:    1 MENFPIVDMGKLNTEDRKSTMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLECVQSEIDDLDWESTFFLRHLPVSSISEIPDLDDDYRKVM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.052e-41
Identity = 75/114 (65.79%), Postives = 95/114 (83.33%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            M  FP+I+LENIN   RA ILE+I +AC+NWGFFELVNHGI  EF+D VE++T+ HY+KCME+RFKE V S+ LE  Q EVNDMDWESTF++RHLP+S I+++ DLDEEY+K+M
Sbjct:    1 MAVFPIINLENINDDGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEAAQAEVNDMDWESTFFLRHLPESNISQMSDLDEEYKKIM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 1.795e-41
Identity = 71/114 (62.28%), Postives = 96/114 (84.21%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            ME+FP+I+LE +NG ERA  +EKI +ACENWGFFE VNHGI  E +D VE++TK HY+KCME+RFKE + +R L+ +++EVND+DWESTFY++HLP S I++VPDLD++YR +M
Sbjct:    1 MESFPIINLEKLNGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLM 114          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 8.907e-41
Identity = 75/114 (65.79%), Postives = 95/114 (83.33%), Query Frame = 3
Query:   87 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            M++FPVI++E + G ERAA ++ IN+ACENWGFFELVNH I  E MD VERLTK HY+KCMEQRFKEL+AS+ +EG   + NDMDWESTF++RHLP S ++E+PDL +E+RKVM
Sbjct:    1 MDSFPVINMEKLEGQERAATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELMASK-VEGAVVDANDMDWESTFFIRHLPVSNLSEIPDLTDEHRKVM 113          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 8.627e-36
Identity = 64/115 (55.65%), Postives = 90/115 (78.26%), Query Frame = 3
Query:   93 NFPVISLE---NINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            NFP+I +E   N NG ER+ +L++I +AC NWGFF++VNH +  E MD VER+TK HY+K  EQ+FK++V ++ L   +++VND+DWESTFY+RH P S I+EVPDLD++YRK+M
Sbjct:    6 NFPIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISEVPDLDDQYRKLM 120          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.068e-33
Identity = 58/111 (52.25%), Postives = 82/111 (73.87%), Query Frame = 3
Query:   96 FPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            FPV+ L  + G ER   +  IN+ACENWGFFE+VNHG+  + MD  E++TK HY+  MEQ+F +++ S+ LE ++ EV D+DWESTFY+RHLPQS + ++PD+ +EYR  M
Sbjct:    7 FPVVDLSKLIGEERDQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLEREVEDVDWESTFYLRHLPQSNLYDIPDMSDEYRTAM 117          
BLAST of FC921798 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 9.871e-32
Identity = 59/113 (52.21%), Postives = 84/113 (74.34%), Query Frame = 3
Query:   96 FPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQ--TEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 428
            FPVI++E + G ER A +E++++ACENWGFFE++NHGI  E MD VE++TK HY++  EQRF E  +    EG     +   +DWESTF+VRHLP+S I ++PDLD++YR++M
Sbjct:    7 FPVINMELLAGEERPAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLM 119          
The following BLAST results are available for this feature:
BLAST of FC921798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ACCO3_CUCME1.918e-4366.961-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO1_MALDO2.504e-4365.791-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO2_MALDO2.769e-4264.911-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO_PEA4.723e-4263.161-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_CUCME1.052e-4165.791-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO1_ARATH1.795e-4162.281-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO_PERAE8.907e-4165.791-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_DIACA8.627e-3655.65Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_BRAJU3.068e-3352.251-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_ORYSJ9.871e-3252.211-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionC06052E03T7 RindPdigS Citrus sinensis cDNA clone C06052E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921798 ID=FC921798; Name=FC921798; organism=Citrus sinensis; type=EST; length=508bp
CGCGGGGAATTAACAAGCTCACAAACACATACACAAACACAAACACTCAC
AAACACACAGCCTTGTTAAAGAAAGAATTCAGAGATATGGAGAACTTCCC
CGTTATCAGCTTGGAGAACATCAATGGTGCTGAAAGAGCGGCTATCTTGG
AGAAGATCAACGAGGCCTGTGAGAACTGGGGCTTCTTTGAGCTGGTGAAT
CATGGAATTGAGCCGGAGTTTATGGACACAGTGGAGAGATTGACCAAGGC
GCATTACAGAAAATGTATGGAGCAAAGATTCAAGGAGCTTGTTGCAAGCA
GGGCACTTGAAGGTATCCAAACCGAGGTCAATGACATGGACTGGGAAAGC
ACTTTCTATGTGCGTCACCTCCCTCAGTCGACCATCAATGAAGTCCCAGA
TCTTGATGAGGAATACAGGAAGGTGATGAAGGAATTTGCATTGAAATTGG
AGAAATTAGCAGAGGAGCTATTGGACTTGTTATGCGAGAATCTTGGATTA
GAGAAGGG
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