FC921795

Overview
NameFC921795
Unique NameFC921795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length388
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11
Identity = 42/87 (48.28%), Postives = 59/87 (67.82%), Query Frame = 3
Query:  123 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP----IDWNTRVKIALCAAQGLTFLHEE 371
            QG +EF+ +V  L+ L HPNL  L+G+ A DG DQR+L+YE +  GSL+  ++   D PP    +DWN R+KIA  AA+GL FLH++
Sbjct:  123 QGNREFLVEVLMLSLLHHPNLVNLIGYCA-DG-DQRLLVYEFMPLGSLEDHLH---DLPPDKEALDWNMRMKIAAGAAKGLEFLHDK 204          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11
Identity = 42/124 (33.87%), Postives = 71/124 (57.26%), Query Frame = 3
Query:    9 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV---KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHE 368
            +R + EG    +Y+A F D     +KF   V  ++ S  G    +EF + V++++S+ H N+ +L+G+ +  G  + ML+YE    GSL R ++   D   P+ WNTR++IAL  A+ + +LHE
Sbjct:  418 NRLLGEGTIGRVYKAKFQD----GRKF--AVKEIDSSLLGKGNPEEFSHIVSSISSIHHKNMAELVGYCSEQG--RNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHE 533          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 3
Query:   90 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQ 383
            E  V RL+ +S QG  EF N++  LA LQH NL +L+GF  +   ++R+L+YE + + SLD+ I+       +DW  R K+    A+GL +LHE+  F+
Sbjct:  381 EIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQ--GEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFR 477          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11
Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            I +G    +Y+ +F +        E  V RL+ SS QG  EF N+V  +A LQH NL +LLGF    G  +R+L+YE + + SLD  ++  +    +DW  R K+    A+G+ +LH++
Sbjct:  343 IGQGGFGEVYKGTFSNGT------EVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSI--GGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQD 453          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11
Identity = 41/120 (34.17%), Postives = 73/120 (60.83%), Query Frame = 3
Query:    9 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLH 365
            D  I  G    +Y+A   D ++ + K       ++ S QG +EF+ ++ T+  ++H NL  LLG+  + G D+R+L+YE + +GSL+ +++  +  G  ++W+TR KIA+ +A+GL FLH
Sbjct:  886 DSLIGSGGFGDVYKAILKDGSAVAIK-----KLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGY-CKVG-DERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLH 998          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 3
Query:   99 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGF--HARDGSDQRMLIYERLFHGSLDRLIY--GRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            V ++ PSS QGV+EF+ ++ +L  L+H NL  L G+  H  D     +LIY+ + +GSLD L+Y   R  G  + WN R +IA   A GL +LHEE
Sbjct:  394 VKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKND----LLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEE 485          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.374e-11
Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            I EG    +Y+    D  + + K  ++      S QG +EF+ ++  +++LQHPNL KL G        + +L+YE L + SL R ++G       +DW+TR KI +  A+GL +LHEE
Sbjct:  675 IGEGGFGPVYKGVLADGMTIAVKQLSS-----KSKQGNREFVTEIGMISALQHPNLVKLYGCCIE--GKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEE 786          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.374e-11
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPS--SQGVKE-FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            I +G S ++Y+A   +    +  K +  TV  LN    S GV++ F  +V TL S++H N+ + LG       + R+L+Y+ + +GSL  L++ RS    + W  R KI L AAQGL +LH +
Sbjct:  791 IGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLG--CCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHD 911          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.374e-11
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 3
Query:   99 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 365
            + RLN  S QG  E+ ++VN L  L H NL KLLG+   D   + +L+YE +  GSL+  ++ R+D  P  W+ R+KI + AA+GL FLH
Sbjct:  123 IKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCRED--KELLLVYEFMPKGSLESHLFRRND--PFPWDLRIKIVIGAARGLAFLH 208          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.374e-11
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 3
Query:   90 EATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQ 383
            E  V RL+  S QG  EF N++  LA LQH NL +LLGF       +R+L+YE + + SLD  I+       +DW  R K+    A+GL +LHE+  ++
Sbjct:  385 EIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIE--GQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYR 481          
The following BLAST results are available for this feature:
BLAST of FC921795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PBS1_ARATH1.160e-1148.28Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
SRF4_ARATH1.515e-1133.87Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
CRK29_ARATH1.515e-1139.39Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK15_ARATH1.515e-1135.29Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
BRI1_ARATH1.515e-1134.17Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
LRKA1_ARATH2.583e-1142.71Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y5343_ARATH3.374e-1134.45Probable LRR receptor-like serine/threonine-protei... [more]
RCH1_ARATH3.374e-1134.96LRR receptor-like serine/threonine-protein kinase ... [more]
CX32_ARATH3.374e-1143.33Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK28_ARATH3.374e-1139.39Cysteine-rich receptor-like protein kinase 28 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC06052D11T7 RindPdigS Citrus sinensis cDNA clone C06052D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921795 ID=FC921795; Name=FC921795; organism=Citrus sinensis; type=EST; length=388bp
CGCGGGCAGATCGATGCATTTCAGAAGGTCTATCCTCTGTAATGTATAGG
GCTTCGTTTGGAGATGATGCTTCAACTTCAAAAAAGTTTGAAGCCACTGT
TACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGGAATTTATAAATGATG
TAAACACCCTTGCATCATTGCAACATCCAAATCTCTGTAAATTGCTTGGT
TTTCATGCACGTGATGGATCGGACCAGAGAATGTTGATCTATGAGAGACT
TTTTCATGGAAGCTTGGACCGTCTTATTTATGGGAGATCAGATGGGCCTC
CAATTGATTGGAACACCAGGGTAAAAATTGCATTATGTGCTGCACAAGGT
CTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGCAAA
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