FC921795

Overview
NameFC921795
Unique NameFC921795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length388
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.374e-11
Identity = 43/122 (35.25%), Postives = 62/122 (50.82%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPF 380
            I EG   V+Y+    D        E  V RL+  S QG  EF  +V  +  LQH NL KL GF  ++   +R+L+YE + + SLDR ++       +DW  R  I +  ++GL +LHE   F
Sbjct:  339 IGEGGFGVVYKGHLPDG------LEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKES--ERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEF 452          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.374e-11
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            + EG    +Y+    D    + K      RL+ ++Q G  EF N+   +A LQH NL KLLG+       +R+L+YE L H SLD+ I+    G  ++W  R KI    A+GL +LH++
Sbjct:  350 LGEGGFGAVYKGVLSDGQKIAVK------RLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIE--GTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQD 460          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.374e-11
Identity = 44/119 (36.97%), Postives = 67/119 (56.30%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            I +G    +Y+ +  D        E  V RL+ SS QG  EF N+V  +A LQH NL +LLGF   DG ++R+L+YE + + SLD  ++  +    +DW  R KI    A+G+ +LH++
Sbjct:  343 IGQGGFGEVYKGTLSDGT------EVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGF-CLDG-EERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQD 453          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            I EG    +Y+    D  + + K  ++      S QG +EF+ ++  +++LQHPNL KL G        + +L+YE L + SL R ++G       +DW+TR K+ +  A+GL +LHEE
Sbjct:  673 IGEGGFGPVYKGVLADGMTIAVKQLSS-----KSKQGNREFVTEIGMISALQHPNLVKLYGCCIE--GKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEE 784          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 3
Query:  117 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 365
            S+QG K+F  +V  L  + H NL  L+G+   +  D+  LIYE + +G LD  + G+  G  ++W TR+KIAL AAQGL +LH
Sbjct:  611 SAQGYKQFKAEVELLLRVHHKNLVGLVGYC--EEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLH 691          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 3
Query:    9 DRCISEGLSSVMYRASFGDDASTS-KKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 368
            D  + EG    +YRA F D    + KK +++      +     +FI  V+ +A+L HPN+ KL+G+ A  G  Q +++YE   +GSL D L     +   + WN+RVKIAL  A+ L +LHE
Sbjct:  419 DNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTD----DFIEMVSKIANLDHPNVTKLVGYCAEHG--QHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHE 534          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 3
Query:   90 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            +  V RL+ +S QG KEF N+V  +A LQH NL KLLGF      ++++L+YE + + SLD  ++       +DW TR KI    A+G+ +LH++
Sbjct:  364 QVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLE--REEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQD 456          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 43/123 (34.96%), Postives = 65/123 (52.85%), Query Frame = 3
Query:    6 ADRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            ++  + +G    +Y+ +F +        E  V RL   S QG  EF N+V+ L  LQH NL KLLGF   +G D+ +L+YE + + SLD  I+       + W  R +I    A+GL +LHE+
Sbjct:  350 SENTLGQGGFGTVYKGTFPNGQ------EVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGF-CNEG-DEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHED 464          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11
Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = 3
Query:   90 EATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQ 383
            E  V RL+  S+QGV+EF N+ + +A LQH NL  +LGF      ++++L+YE + + SLD+ ++  +    +DW  R KI +  A+G+ +LH + P +
Sbjct:  345 EIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCME--GEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLK 441          
BLAST of FC921795 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11
Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = 3
Query:   18 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 371
            + EG    +Y+    D    + K  +  +R     QG  +F+ ++  ++++QH NL KL G       + R+L+YE L +GSLD+ ++G      +DW+TR +I L  A+GL +LHEE
Sbjct:  699 LGEGGFGPVYKGKLNDGREVAVKLLSVGSR-----QGKGQFVAEIVAISAVQHRNLVKLYGCCYE--GEHRLLVYEYLPNGSLDQALFGEKT-LHLDWSTRYEICLGVARGLVYLHEE 808          
The following BLAST results are available for this feature:
BLAST of FC921795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CRK27_ARATH3.374e-1135.25Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK26_ARATH3.374e-1135.29Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK10_ARATH3.374e-1136.97Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y5344_ARATH4.407e-1133.61Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH4.407e-1143.37Probable LRR receptor-like serine/threonine-protei... [more]
SRF6_ARATH4.407e-1136.07Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
CRK5_ARATH4.407e-1140.00Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK40_ARATH4.407e-1134.96Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK33_ARATH4.407e-1136.36Putative cysteine-rich receptor-like protein kinas... [more]
Y5614_ARATH5.755e-1133.05Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC06052D11T7 RindPdigS Citrus sinensis cDNA clone C06052D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921795 ID=FC921795; Name=FC921795; organism=Citrus sinensis; type=EST; length=388bp
CGCGGGCAGATCGATGCATTTCAGAAGGTCTATCCTCTGTAATGTATAGG
GCTTCGTTTGGAGATGATGCTTCAACTTCAAAAAAGTTTGAAGCCACTGT
TACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGGAATTTATAAATGATG
TAAACACCCTTGCATCATTGCAACATCCAAATCTCTGTAAATTGCTTGGT
TTTCATGCACGTGATGGATCGGACCAGAGAATGTTGATCTATGAGAGACT
TTTTCATGGAAGCTTGGACCGTCTTATTTATGGGAGATCAGATGGGCCTC
CAATTGATTGGAACACCAGGGTAAAAATTGCATTATGTGCTGCACAAGGT
CTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGCAAA
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