CK938692

Overview
NameCK938692
Unique NameCK938692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BACHK (Nucleoside diphosphate kinase OS=Bacillus thuringiensis subsp. konkukian GN=ndk PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.009e-44
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIY 514
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS+ESAE+EI ++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIGIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BACCZ (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ZK / E33L) GN=ndk PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.009e-44
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIY 514
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS+ESAE+EI ++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIGIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BACAN (Nucleoside diphosphate kinase OS=Bacillus anthracis GN=ndk PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.009e-44
Identity = 82/148 (55.41%), Postives = 111/148 (75.00%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIY 514
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS+ESAE+EI ++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIGIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.721e-44
Identity = 85/145 (58.62%), Postives = 108/145 (74.48%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPI-NWQSSLHPW 508
            E+TFI IKPDGVQRGL+GEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI  GRN+IHGSD+ E+A+ EI LWF    + +W  S   W
Sbjct:    4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAQFEIGLWFQASELSDWTPSDQGW 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDKC_DICDI (Nucleoside diphosphate kinase, cytosolic OS=Dictyostelium discoideum GN=ndkC-1 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.721e-44
Identity = 86/147 (58.50%), Postives = 108/147 (73.47%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            E+TF+ +KPDGV RGLVGEII R+EKKGF L GLK +   +  AE HY +   +PFFG L+ +ITSGPVVAM++EG+GVV + R +IG TNP  SAPG+IRGD  +  GRNIIHGSDSVESA +EIALWF    +  +   +P +YE
Sbjct:    9 ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE 155          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.834e-44
Identity = 82/147 (55.78%), Postives = 110/147 (74.83%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPIN-WQSSLHPWI 511
            ME+T++MIKPDGVQR L+GEI+ RFEKKGF+L G KLMTV +  AE HY +   +PFFG L+++ITSGPV AM+WEGE V+ T R ++GATNPA + PGTIRGD  +    N+IHGSDS ESA++EI ++F    +N +   ++ W+
Sbjct:    1 MERTYLMIKPDGVQRNLIGEIVSRFEKKGFTLIGAKLMTVTKEQAETHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGATNPADAEPGTIRGDFGVQVAMNVIHGSDSPESAKREIDIFFDSSELNEYDKVVNRWV 147          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.541e-44
Identity = 81/149 (54.36%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWIYE 517
            ME+T++M+KPDGVQRGL+G+II +FE+KG+ + GLK+M + R  AE+HY + + KPFF  L+++ITSGPVVAM+ EG+ VV T R ++GATNP ++APGTIR    +  GRNIIHGSDS+ESA++EI ++F  +  I++  ++  WIYE
Sbjct:    1 MERTYLMVKPDGVQRGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGRNIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_ASHGO (Nucleoside diphosphate kinase OS=Ashbya gossypii GN=NDK1 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.541e-44
Identity = 82/148 (55.41%), Postives = 110/148 (74.32%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWIYE 517
            E+TFI IKPDGVQRGL+ +I+ RFE +G+ L G+KL+T      ++HY +   KPFF  ++ Y+TSGP++A +WEG+ VVK GR I+GATNP  SAPGTIRGD A+  GRN+ HGSDSVESA++EI LWF  +  ++W+ +   WIYE
Sbjct:    4 ERTFIAIKPDGVQRGLISKILSRFESRGYKLVGIKLVTPTENLLKQHYAEHVEKPFFPKMLAYMTSGPILATVWEGKDVVKQGRVILGATNPLNSAPGTIRGDFALDMGRNVCHGSDSVESAQREIDLWFKKEELVDWKLNQLSWIYE 151          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.116e-43
Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIYE 517
            +E+TF+ IKPDGVQRGL+ EI+ RFE KGF L GLK +T  +  AEKHY     +PFF  L+++ITSGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD  ++A  EI LWF +   ++W  S   W  E
Sbjct:    3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BRUMA (Nucleoside diphosphate kinase OS=Brugia malayi GN=NDK PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.116e-43
Identity = 81/148 (54.73%), Postives = 107/148 (72.30%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWIYE 517
            E+TFI IKPD VQRGL+G+I  RFE++G+ L  +K++   +   E HY++L  KPFF  L+ Y++SGPV+AM+WEG  VVK  R ++GATNP  S PGTIRGD +I TGRNI+HGSDS+ SAE+EI  WF P+    W S+   W+YE
Sbjct:    6 ERTFICIKPDAVQRGLIGKIFERFEQRGYKLVAMKMLKATKSHLEIHYQELQGKPFFNDLVGYMSSGPVIAMVWEGLDVVKQARQMLGATNPLNSMPGTIRGDFSIQTGRNIVHGSDSLPSAEREITHWFKPEELCEWSSATATWVYE 153          
The following BLAST results are available for this feature:
BLAST of CK938692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_BACHK1.009e-4455.41Nucleoside diphosphate kinase OS=Bacillus thuringi... [more]
NDK_BACCZ1.009e-4455.41Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACAN1.009e-4455.41Nucleoside diphosphate kinase OS=Bacillus anthraci... [more]
NDK_SYNPW1.721e-4458.62Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDKC_DICDI1.721e-4458.50Nucleoside diphosphate kinase, cytosolic OS=Dictyo... [more]
NDK_BACHD3.834e-4455.78Nucleoside diphosphate kinase OS=Bacillus halodura... [more]
NDK_DESRM6.541e-4454.36Nucleoside diphosphate kinase OS=Desulfotomaculum ... [more]
NDK_ASHGO6.541e-4455.41Nucleoside diphosphate kinase OS=Ashbya gossypii G... [more]
NDK_PROM11.116e-4355.70Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_BRUMA1.116e-4354.73Nucleoside diphosphate kinase OS=Brugia malayi GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_F04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938692 ID=CK938692; Name=CK938692; organism=Citrus sinensis; type=EST; length=753bp
GGGGCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTTAAAACAAGT
TGGTTTCTCTGAATCTCAAAGAAATGGAACAGACTTTCATCATGATCAAG
CCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGA
GAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCC
CTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGT
TCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGA
GGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACC
CTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGGGACG
GGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCGAGAAAGA
GATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTC
ACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTT
CCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGT
TACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCAA
TCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATATACAATATT
TAAGCTTTTTTGTTGACTGTATTATGAATTGAGTTTGTTAATGGTTAGCA
CAT
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