CK938673

Overview
NameCK938673
Unique NameCK938673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 6.813e-42
Identity = 75/137 (54.74%), Postives = 104/137 (75.91%), Query Frame = 3
Query:  120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 530
            N+ SGM V D  K  F EL+ K+ +R+++FKID           G P E+Y+DF +++P+++CRYAVYDFD+ T +NCQKSKIFFIAWSP TSR+R++MLYA+SKDRF+RE++GI  E+QATDP+EM L+ ++ R N
Sbjct:    3 NSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.898e-42
Identity = 80/136 (58.82%), Postives = 102/136 (75.00%), Query Frame = 3
Query:  120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527
            NA SGM V D  K  F EL+ K+ +R++I+KI+           G P ESYEDF A LP ++CRYAVYDFD++T EN QKS+IFFIAWSP T+R+R++M+YA+SKDRF+RELDGI  E+QATDPTEM L+  R+RA
Sbjct:    3 NAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRA 138          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.518e-41
Identity = 77/136 (56.62%), Postives = 103/136 (75.74%), Query Frame = 3
Query:  120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527
            N+ SGM V D  K  F EL+ K+  R+++FKI+           G P ESY+DF A LP ++CRYAV+DFD+VT ENCQKSKIFFI+W+P TSR+R++MLYA+SKDRF+RELDGI  E+QATDP+EM ++ +++RA
Sbjct:    3 NSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.982e-41
Identity = 79/135 (58.52%), Postives = 99/135 (73.33%), Query Frame = 3
Query:  123 ATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527
            AT GM V +  +  F E++ KKVHR+V++KID           GGP E YE+  AALP +DCRYAV+DFD+VT +NCQKSKIFFIAWSP+ SRIRA++LYATSK   RR LDG+HYE+QATD +EM  + +R RA
Sbjct:    8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGRA 142          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.768e-41
Identity = 77/136 (56.62%), Postives = 102/136 (75.00%), Query Frame = 3
Query:  120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527
            N++SGM V D  K  F EL+ K+  R+++FKI+           G P ESY+DF   LP N+CRYAV+DFD+VT ENCQKSKIFFI+WSP TSR+R++MLYA++KDRF+RELDGI  E+QATDP+EM ++ ++ RA
Sbjct:    3 NSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKARA 138          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.533e-41
Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 3
Query:  120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527
            NA SGM V D  K  F EL+ K+ +R++IF+ID           G P E+Y+DF A+LP N+CRYAV+DFD++T ENCQKSKIFFIAWSP +SR+R +M+YA+SKDRF+RELDGI  E+QATDP+EM  + +++RA
Sbjct:    3 NAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKL--GNPDETYDDFTASLPANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 136          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF9_ORYSJ (Actin-depolymerizing factor 9 OS=Oryza sativa subsp. japonica GN=ADF9 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.838e-41
Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 3
Query:  120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 530
            N+ SG+ V D  K  F EL+ ++  R+++FKID           G  AE YEDFAA LP ++CRYAVYD D+VT ENCQKSKIFF +WSP T+R R++MLYA+SKDRFRRELDGI  EIQATDP+EM L+ +R RA+
Sbjct:    3 NSASGLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLPADECRYAVYDLDFVTDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRARAH 139          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.285e-40
Identity = 77/135 (57.04%), Postives = 101/135 (74.81%), Query Frame = 3
Query:  123 ATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527
            AT+GM V D   ++F +++ KKVHRY++FKI+           GG  ESY D   +LP +DCRYAV+DFD+VT +NC+KSKIFFIAWSP  S+IRA++LYATSKD  RR L+GIHYE+QATDPTEM  + +++RA
Sbjct:    8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRA 142          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.678e-40
Identity = 75/136 (55.15%), Postives = 102/136 (75.00%), Query Frame = 3
Query:  120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527
            N+ SGM V D  K  F EL+ K+  R++ FKID           G P ++Y+DF A++P ++CRYAV+DFD+VT ENCQKSKIFFI+WSP TS++R++MLYA+SKDRF+RELDGI  E+QATDP+EM ++ ++ RA
Sbjct:    3 NSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKARA 138          
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.678e-40
Identity = 78/137 (56.93%), Postives = 102/137 (74.45%), Query Frame = 3
Query:  120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 530
            NA SGM V D  K  F EL+ K+  R +++KI+           G P +SY+DFAA+LP +DCRY +YDFD+VT+ENCQKSKIFFIAWSP T+++R +M+YA+SKDRF+RELDGI  E+QATDPTEM L+  ++R N
Sbjct:    3 NAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKL--GEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
The following BLAST results are available for this feature:
BLAST of CK938673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ADF8_ARATH6.813e-4254.74Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF2_PETHY8.898e-4258.82Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF1_ORYSJ1.518e-4156.62Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]
ADF5_ORYSJ1.982e-4158.52Actin-depolymerizing factor 5 OS=Oryza sativa subs... [more]
ADF_LILLO5.768e-4156.62Actin-depolymerizing factor OS=Lilium longiflorum ... [more]
ADF7_ARATH7.533e-4157.35Actin-depolymerizing factor 7 OS=Arabidopsis thali... [more]
ADF9_ORYSJ9.838e-4158.39Actin-depolymerizing factor 9 OS=Oryza sativa subs... [more]
ADF5_ARATH1.285e-4057.04Actin-depolymerizing factor 5 OS=Arabidopsis thali... [more]
ADF6_ORYSJ1.678e-4055.15Actin-depolymerizing factor 6 OS=Oryza sativa subs... [more]
ADF2_ARATH1.678e-4056.93Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_H05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938673 ID=CK938673; Name=CK938673; organism=Citrus sinensis; type=EST; length=803bp
GCCATTACGGCCGGGGGAGNNAATACATTTTCGCTCTCTTTCATTGTTTA
TTTACTTGCTCTGGTGATCTGCGTTCTGTTGCTGCCGCCGCCATGTCTTT
CAGAGGACTAAGTCGACCAAATGCCACTTCTGGCATGGGCGTTGCTGATC
ACAGCAAAAATGCATTCACGGAATTGCAAAGGAAGAAGGTTCACCGTTAT
GTGATTTTTAAGATTGATGAGAAGAAAAAGGAGGTTGTGGTTGAGAAGAC
TGGTGGCCCCGCTGAAAGCTACGAGGATTTCGCTGCTGCTTTGCCTGAGA
ATGATTGTCGATATGCTGTATATGACTTTGACTATGTGACTTCTGAGAAT
TGTCAGAAGAGCAAGATATTCTTCATTGCATGGTCCCCTTCAACCTCTAG
AATCCGTGCCGAGATGCTGTACGCCACATCTAAAGACAGATTTCGACGGG
AGCTGGATGGTATCCACTATGAGATTCAGGCTACTGATCCTACAGAGATG
GATCTTGAAGAGCTTAGAAACCGTGCAAACTGAAGAGTCTGCAGTTTTGC
AGTTTCTTCCCTCCATGAAAAAAAAATCAGCAAGGGGTTCTGCCAACTGT
TGCTCCTTGCTTCATTAATCTATGTGCAAAAATCTATGCGTAATCTTCGA
ATAACTGGCAATGTGGGAAGACTGATTGGGCTGAAGTTATCTTGTTGTGG
TGAAATTAGCTTCCCAGTGGTTTATTGCTACTCTGATGAATATAAGTTTG
TTTGTTGGGTATTTGNNNATCCTAGAACATATTATCGTAACATTAATCTC
TAA
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