CK938673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.192e-40 Identity = 74/137 (54.01%), Postives = 104/137 (75.91%), Query Frame = 3 Query: 120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 530 NA SGM V D K F EL+ K+ HR++I+KI+ G P +++ED AA+LP ++CRYA++DFD+V+SE +S+IFF+AWSP T+R+R++M+YA+SKDRF+RELDGI E+QATDPTEMDL+ ++RAN Sbjct: 3 NAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRAN 139
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.855e-39 Identity = 73/129 (56.59%), Postives = 96/129 (74.42%), Query Frame = 3 Query: 141 VADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527 + D K +F E++ KKVHRYV++K++ G ESY+D AA+LPE+DCRYAV+DFDYVT +NC+ SKIFFI WSP SRIR +M+YATSK RR LDG+HYE+QATDPTEM +++++RA Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRA 129
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.855e-39 Identity = 78/136 (57.35%), Postives = 101/136 (74.26%), Query Frame = 3 Query: 120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527 NA SGM V D K F EL+ K+ +R++IF+ID G P E+Y+DF LP N+CRYAVYDFD+ T+EN QKSKIFFIAWSP +SR+R +M+YA+SKDRF+RELDGI E+QATDP+EM L+ +++RA Sbjct: 3 NAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKL--GSPQENYDDFTNYLPPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSRA 136
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.398e-39 Identity = 74/137 (54.01%), Postives = 98/137 (71.53%), Query Frame = 3 Query: 120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 530 N++SG+ V D K F EL+ ++ R+++F+ID G P + Y DF +LP N+CRYA+YD D+ T ENCQKSKIFF +WSP T+R R++MLYA+SKDRFRRELDGI EIQATDP+EM L+ +R+R N Sbjct: 3 NSSSGLAVNDECKVKFRELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRSRTN 139
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF8_ORYSJ (Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 5.969e-38 Identity = 78/130 (60.00%), Postives = 97/130 (74.62%), Query Frame = 3 Query: 141 VADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 530 V + SK+AF EL R+KVHRYVIFKID TG P ESY+DF A+LP + AVYD D+V+ +NC+KSKIFFI+WSPS S IRA+ +YA +++FR ELDG+H+EIQATDP +MDLE LR RAN Sbjct: 19 VPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPAD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 144
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.795e-38 Identity = 71/137 (51.82%), Postives = 99/137 (72.26%), Query Frame = 3 Query: 120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 530 N++SG+ V+D K F +L+ ++ R+++F+ID G P + Y DF +LP ++CRYA+YD D+ T ENCQKSKIFF +WSP T+R R++MLYA+SKDRFRRELDGI EIQATDP+EM L+ +++R N Sbjct: 3 NSSSGLAVSDECKVKFRDLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKSRTN 139
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.275e-36 Identity = 71/127 (55.91%), Postives = 98/127 (77.17%), Query Frame = 3 Query: 147 DHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527 D+ K F EL +K++ R++IF+ID G P E+Y+DF A+LP ++CRYAV+DFD+ T+ENCQKSKIFFIAWSP +SR+R +M+YA+SKDRF+RELDGI E+QATDP+EM + +++RA Sbjct: 2 DNCKLKFLEL-KKRIFRFIIFRIDGQQVVVEKL--GNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 125
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.773e-35 Identity = 67/136 (49.26%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 527 NA SG+ V D F ELQ K++HR++ FK+D G A SY+DF +LPENDCRYA+YDFD+VT+E+ QKS+IF+I WSPS+++++++MLYA+S +F+ L+GI E+QATD +E+ L+E+++RA Sbjct: 3 NARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDRA 138
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.987e-33 Identity = 62/135 (45.93%), Postives = 96/135 (71.11%), Query Frame = 3 Query: 120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNR 524 N++SG+ + D K F ELQ K++HR++ F +D G SYEDF ++LPE DCR+A+YDFD++T+E+ KS+IF+I WSP +++R++MLYA+S +RF++EL+GI E+QATD E+ L+ L++R Sbjct: 3 NSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137
BLAST of CK938673 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.740e-27 Identity = 56/148 (37.84%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 120 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSE-----------NCQKSKIFFIAWSPSTSRIRAEMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 530 NATSG+ V++ K F EL+ + HR+V+FKID G +++ A+LP + CRYAVYD D+ S+ +SKIFF++WSP+ + +R++M+YA+S + F++ELDG+ ++QATDP+E+ L+ L++ + Sbjct: 3 NATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150 The following BLAST results are available for this feature:
BLAST of CK938673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938673 ID=CK938673; Name=CK938673; organism=Citrus sinensis; type=EST; length=803bpback to top |