CK938656

Overview
NameCK938656
Unique NameCK938656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSEPF (Probable M18 family aminopeptidase 2 OS=Pseudomonas fluorescens (strain Pf0-1) GN=apeB PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.282e-38
Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            + IQ+S LVSAD AH +HPNY +KH+ NH PKL+ G VIK N+NQRYATN+ T+  FR +     +PVQ FVVR+DM CGSTIGPI AS +G+RTVD+G P  +MHSIRE+C   D+ H  +   AF+
Sbjct:  296 RTIQKSLLVSADNAHGVHPNYAEKHDANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASNLGVRTVDIGLPTFAMHSIRELCGSHDLAHLVKVLSAFY 423          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: DNPEP_SCHPO (Putative aspartyl aminopeptidase OS=Schizosaccharomyces pombe GN=SPAC4F10.02 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.212e-37
Identity = 76/146 (52.05%), Postives = 104/146 (71.23%), Query Frame = 2
Query:   89 SKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSELDAKIKVD 526
            S L   ++ +SFLVSADMAHA+HPNY  ++E+++ P L+ G VIK NANQRY TN+    + ++VA   ++P+Q FVVRND  CGSTIGP LA+  G+RT+D+G P LSMHS REMC   D +++   F +FFQ F+ L+ KI +D
Sbjct:  321 SSLFSISMVKSFLVSADMAHAMHPNYSSRYENSNTPFLNKGTVIKVNANQRYTTNSAGIVLLKKVAQLADVPIQSFVVRNDSPCGSTIGPKLAAMTGMRTLDLGNPMLSMHSCREMCGSKDFEYAVVLFSSFFQNFANLEEKIIID 466          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSEU2 (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=apeB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.212e-37
Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 2
Query:   56 LSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            L +I      +S+   + IQ+S L+SAD AH +HPNY DKH+ NH PKL+ G VIK N+NQRYATN+ T+  FR +     +PVQ FVVR+DM CGSTIGPI AS +GIRTVD+G P  +MHSIRE+    D+ H  +   AF+
Sbjct:  280 LEQIVQRLLPSSEDYVRTIQKSLLISADNAHGIHPNYADKHDANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASHLGIRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLSAFY 423          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSEP1 (Probable M18 family aminopeptidase 2 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=apeB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.212e-37
Identity = 73/129 (56.59%), Postives = 93/129 (72.09%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ 490
            + +QRS +VSAD AH +HPNY DKH+ NH PKL+ G VIK N NQRYATN+ T+  FR +     +PVQ FVVR+DM CGSTIGPI AS +G+RTVD+G P  +MHSIRE+C   D+ H  +   AF++
Sbjct:  296 RTLQRSLMVSADNAHGVHPNYADKHDGNHGPKLNAGPVIKVNNNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASHLGVRTVDIGLPTFAMHSIRELCGSHDLAHLVKVLTAFYR 424          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSEAB (Probable M18 family aminopeptidase 2 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=apeB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.212e-37
Identity = 76/144 (52.78%), Postives = 95/144 (65.97%), Query Frame = 2
Query:   56 LSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            L ++            +AIQRS LVSAD AH +HPNY DKH+ NH P L+GG VIK N+NQRYATN+ T+  FR +     +PVQ FV R+DM CGSTIGPI AS VG+RTVD+G P  +MHSIRE+    D+ H  +   AF+
Sbjct:  280 LEQVLRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYADKHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLGAFY 423          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSE14 (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=apeB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.212e-37
Identity = 76/144 (52.78%), Postives = 99/144 (68.75%), Query Frame = 2
Query:   56 LSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            L +I      +S+   + IQ+S L+SAD AH +HPNY +KH+ NH PKL+ G VIK N+NQRYATN+ T+  FR +     +PVQ FVVR+DMACGSTIGPI AS +GIRTVD+G P  +MHSIRE+    D+ H  +   AF+
Sbjct:  280 LEQIVQRLLPSSEDYVRTIQKSLLISADNAHGIHPNYAEKHDANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMACGSTIGPITASHLGIRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLSAFY 423          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSESM (Probable M18 family aminopeptidase 2 OS=Pseudomonas syringae pv. tomato GN=apeB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.068e-37
Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 2
Query:   56 LSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            L +I      +S+   + IQ+S L+SAD AH +HPNY DKH+ NH PKL+ G VIK N+NQRYATN+ T+  FR +     +PVQ FVVR+DM CGSTIGPI AS +GIRTVD+G P  +MHSIRE+    D+ H  +   AF+
Sbjct:  280 LEQIVQRLLPSSEDYVRTIQKSLLISADNAHGIHPNYADKHDANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAEEVPVQSFVVRSDMGCGSTIGPITASHLGIRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLGAFY 423          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSEFS (Probable M18 family aminopeptidase 2 OS=Pseudomonas fluorescens (strain SBW25) GN=apeB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.701e-37
Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            + IQ+S LVSAD AH +HPNY +KH+ NH PKL+ G VIK N+NQRYATN+ T+  FR +     +PVQ FVVR+DM CGSTIGPI AS +G+RTVD+G P  +MHSIRE+C   D+ H  +   AF+
Sbjct:  296 RTIQKSLLVSADNAHGVHPNYAEKHDANHGPKLNAGPVIKVNSNQRYATNSETAGFFRHLCMAQEVPVQSFVVRSDMGCGSTIGPITASHLGVRTVDIGLPTFAMHSIRELCGSHDLAHLVKVLGAFY 423          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSEAE (Probable M18 family aminopeptidase 2 OS=Pseudomonas aeruginosa GN=apeB PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.701e-37
Identity = 75/144 (52.08%), Postives = 95/144 (65.97%), Query Frame = 2
Query:   56 LSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            L ++            +AIQRS LVSAD AH +HPNY D+H+ NH P L+GG VIK N+NQRYATN+ T+  FR +     +PVQ FV R+DM CGSTIGPI AS VG+RTVD+G P  +MHSIRE+    D+ H  +   AF+
Sbjct:  280 LEQVLRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLGAFY 423          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_PSEA8 (Probable M18 family aminopeptidase 2 OS=Pseudomonas aeruginosa (strain LESB58) GN=apeB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.701e-37
Identity = 75/144 (52.08%), Postives = 95/144 (65.97%), Query Frame = 2
Query:   56 LSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            L ++            +AIQRS LVSAD AH +HPNY D+H+ NH P L+GG VIK N+NQRYATN+ T+  FR +     +PVQ FV R+DM CGSTIGPI AS VG+RTVD+G P  +MHSIRE+    D+ H  +   AF+
Sbjct:  280 LEQVLRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITASQVGVRTVDIGLPTFAMHSIRELAGSHDLAHLVKVLGAFY 423          
The following BLAST results are available for this feature:
BLAST of CK938656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
APEB_PSEPF9.282e-3857.03Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
DNPEP_SCHPO1.212e-3752.05Putative aspartyl aminopeptidase OS=Schizosaccharo... [more]
APEB_PSEU21.212e-3752.78Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEP11.212e-3756.59Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEAB1.212e-3752.78Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSE141.212e-3752.78Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSESM2.068e-3752.78Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEFS2.701e-3757.03Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEAE2.701e-3752.08Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEA82.701e-3752.08Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_H09 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938656 ID=CK938656; Name=CK938656; organism=Citrus sinensis; type=EST; length=758bp
GGGGGTTGGATCANNNTCAGCTCAAGGAGCTGGATCACCTGCCATGCTAG
ATGCTCTATCACGAATCACAAATTCCTTCTGTTCAAATTCTAAGCTGATT
GAGAAGGCAATCCAGAGGAGTTTCCTTGTTTCTGCTGATATGGCACATGC
CCTACACCCTAATTATATGGACAAACATGAAGACAATCATCAGCCAAAGT
TGCATGGAGGACTTGTCATCAAGCACAATGCAAATCAACGCTATGCAACC
AATGCCGTGACATCCTTTGTTTTTAGGGAGGTAGCCTCAAAGCATAACCT
TCCTGTCCAGGATTTCGTGGTCCGCAATGACATGGCTTGTGGTTCAACTA
TTGGCCCCATCTTAGCAAGTGGCGTTGGCATTCGTACAGTTGATGTGGGT
GCCCCGCAGTTATCAATGCACAGTATAAGAGAAATGTGTGCTGTTGATGA
TGTGAAGCATTCATATGAGCATTTCAAGGCCTTCTTCCAAGAGTTCTCTG
AGCTTGATGCGAAGATCAAGGTTGATATGTAGATCTCCGTTTCTTATTAC
TCGGCAGACTGTTCAACAGCTGCTTATTCTATTGGTTTTCGCTGATGTAA
TACATGCTACATTACTGAGCAATCGTTGTGCTGTATAAAATCAAATATCA
TGACTACTGTAGAATTATTGGATCAGGGGATCCTTTGTCGTCCGTGCTAA
TAAGTATTTTATCAAAATAAAACACTTGCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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