CK938656

Overview
NameCK938656
Unique NameCK938656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_MYCTU (Probable M18 family aminopeptidase 2 OS=Mycobacterium tuberculosis GN=apeB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ-EFSE 502
            + +  S L SADMAHA HPNY D+HE +H  +++ G V+K + N RYAT+  T+  F     +  +P+Q +  R D+ CGSTIGP+ A+  GI TVDVGA QL+MHS RE+    DV       +AF   E SE
Sbjct:  299 RRLTTSMLASADMAHATHPNYPDRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAAYSAALQAFLSAELSE 432          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_MYCTA (Probable M18 family aminopeptidase 2 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=apeB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ-EFSE 502
            + +  S L SADMAHA HPNY D+HE +H  +++ G V+K + N RYAT+  T+  F     +  +P+Q +  R D+ CGSTIGP+ A+  GI TVDVGA QL+MHS RE+    DV       +AF   E SE
Sbjct:  299 RRLTTSMLASADMAHATHPNYPDRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAAYSAALQAFLSAELSE 432          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_MYCBT (Probable M18 family aminopeptidase 2 OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=apeB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ-EFSE 502
            + +  S L SADMAHA HPNY D+HE +H  +++ G V+K + N RYAT+  T+  F     +  +P+Q +  R D+ CGSTIGP+ A+  GI TVDVGA QL+MHS RE+    DV       +AF   E SE
Sbjct:  299 RRLTTSMLASADMAHATHPNYPDRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAAYSAALQAFLSAELSE 432          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_MYCBP (Probable M18 family aminopeptidase 2 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=apeB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ-EFSE 502
            + +  S L SADMAHA HPNY D+HE +H  +++ G V+K + N RYAT+  T+  F     +  +P+Q +  R D+ CGSTIGP+ A+  GI TVDVGA QL+MHS RE+    DV       +AF   E SE
Sbjct:  299 RRLTTSMLASADMAHATHPNYPDRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAAYSAALQAFLSAELSE 432          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_MYCBO (Probable M18 family aminopeptidase 2 OS=Mycobacterium bovis GN=apeB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.045e-25
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQ-EFSE 502
            + +  S L SADMAHA HPNY D+HE +H  +++ G V+K + N RYAT+  T+  F     +  +P+Q +  R D+ CGSTIGP+ A+  GI TVDVGA QL+MHS RE+    DV       +AF   E SE
Sbjct:  299 RRLTTSMLASADMAHATHPNYPDRHEPSHPIEVNAGPVLKVHPNLRYATDGRTAAAFALACQRAGVPMQRYEHRADLPCGSTIGPLAAARTGIPTVDVGAAQLAMHSARELMGAHDVAAYSAALQAFLSAELSE 432          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_MYCLE (Probable M18 family aminopeptidase 2 OS=Mycobacterium leprae GN=apeB PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.786e-23
Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 2
Query:  104 KAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFF 487
            + +  S LVSADMAHA HPNY + HE +H  +++ G V+K + N RYAT+  T+  F     +  + +Q +  R D  CGSTIGP+ ++  GI TVDVGA QL+MHS RE+    DV       +AFF
Sbjct:  294 RRLPASLLVSADMAHATHPNYPECHEPSHLIEVNAGPVLKVHPNLRYATDGRTAAAFEVACQQAGVRLQRYEHRADRPCGSTIGPLASARTGIPTVDVGAAQLAMHSARELMGAHDVAVYSAALQAFF 421          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: APEB_BORBU (Probable M18 family aminopeptidase 2 OS=Borrelia burgdorferi GN=apeB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.102e-22
Identity = 47/126 (37.30%), Postives = 81/126 (64.29%), Query Frame = 2
Query:  116 RSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQE 493
            +SF +S D  H +HP Y  KH+ N+Q  L  G+V+K++AN RYAT +      + +A K+N+ +Q+ +++ ++  G+TIGPI  +  GI T+D+G P  +MHS+RE  ++ D   + +  +AFF++
Sbjct:  296 KSFNISIDSVHGIHPGYTSKHDPNYQANLGKGVVVKNSANFRYATTSTGFAKLKNLAIKNNIKIQEIIMKANVPSGTTIGPISNARTGIETIDIGTPMWAMHSLRETVSIADHIEAIKLLRAFFEK 421          
BLAST of CK938656 vs. ExPASy Swiss-Prot
Match: AMPL_YEAST (Vacuolar aminopeptidase 1 OS=Saccharomyces cerevisiae GN=APE1 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.067e-17
Identity = 51/157 (32.48%), Postives = 84/157 (53.50%), Query Frame = 2
Query:   56 LSRITNSFCSNSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFVFREVASKHNLPVQDFVVRNDMACGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDV-------KHSYEHFKAFFQEFSEL 505
            + R +++F      +      S ++SAD+ H  +PN+ + +  NH P  + G+ +  + N   AT+ V + +  E+A ++   VQ F ++N+   G TIGP LAS  G RT+D+G  QLSMHSIR      DV          ++H+++ + EF EL
Sbjct:  358 VERSSSAFTKKPVDLHTVWANSIILSADVNHLYNPNFPEVYLKNHFPVPNVGITLSLDPNGHMATDVVGTALVEELARRNGDKVQYFQIKNNSRSGGTIGPSLASQTGARTIDLGIAQLSMHSIRAATGSKDVGLGVKFFNGFFKHWRSVYDEFGEL 514          
The following BLAST results are available for this feature:
BLAST of CK938656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
APEB_MYCTU4.045e-2545.52Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCTA4.045e-2545.52Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCBT4.045e-2545.52Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCBP4.045e-2545.52Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCBO4.045e-2545.52Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_MYCLE3.786e-2344.53Probable M18 family aminopeptidase 2 OS=Mycobacter... [more]
APEB_BORBU1.102e-2237.30Probable M18 family aminopeptidase 2 OS=Borrelia b... [more]
AMPL_YEAST1.067e-1732.48Vacuolar aminopeptidase 1 OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_H09 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938656 ID=CK938656; Name=CK938656; organism=Citrus sinensis; type=EST; length=758bp
GGGGGTTGGATCANNNTCAGCTCAAGGAGCTGGATCACCTGCCATGCTAG
ATGCTCTATCACGAATCACAAATTCCTTCTGTTCAAATTCTAAGCTGATT
GAGAAGGCAATCCAGAGGAGTTTCCTTGTTTCTGCTGATATGGCACATGC
CCTACACCCTAATTATATGGACAAACATGAAGACAATCATCAGCCAAAGT
TGCATGGAGGACTTGTCATCAAGCACAATGCAAATCAACGCTATGCAACC
AATGCCGTGACATCCTTTGTTTTTAGGGAGGTAGCCTCAAAGCATAACCT
TCCTGTCCAGGATTTCGTGGTCCGCAATGACATGGCTTGTGGTTCAACTA
TTGGCCCCATCTTAGCAAGTGGCGTTGGCATTCGTACAGTTGATGTGGGT
GCCCCGCAGTTATCAATGCACAGTATAAGAGAAATGTGTGCTGTTGATGA
TGTGAAGCATTCATATGAGCATTTCAAGGCCTTCTTCCAAGAGTTCTCTG
AGCTTGATGCGAAGATCAAGGTTGATATGTAGATCTCCGTTTCTTATTAC
TCGGCAGACTGTTCAACAGCTGCTTATTCTATTGGTTTTCGCTGATGTAA
TACATGCTACATTACTGAGCAATCGTTGTGCTGTATAAAATCAAATATCA
TGACTACTGTAGAATTATTGGATCAGGGGATCCTTTGTCGTCCGTGCTAA
TAAGTATTTTATCAAAATAAAACACTTGCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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