CK938655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_CLOTE (Undecaprenyl pyrophosphate synthetase OS=Clostridium tetani GN=uppS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15 Identity = 35/67 (52.24%), Postives = 53/67 (79.10%), Query Frame = -2 Query: 84 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 284 L+ + +P+H+A+IMDGN RWA++R LP S GH+AGV ++R++V+ C GV+ LT++AFS +NW RP Sbjct: 21 LDLDNIPKHIAIIMDGNGRWAKERKLPRSLGHKAGVETIRDIVKECNNIGVRYLTLYAFSTENWKRP 87
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: DDPS3_ARATH (Dehydrodolichyl diphosphate synthase 3 OS=Arabidopsis thaliana GN=At5g58780 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.030e-15 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = -2 Query: 87 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVR 284 L RE MPRHVAVIMDGN RWA++ GL +S GHEAG + L E ELC + G+ ++ FAFS +NW R Sbjct: 65 LQRELMPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWGR 130
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_THETN (Undecaprenyl pyrophosphate synthetase OS=Thermoanaerobacter tengcongensis GN=uppS PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.346e-15 Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = -2 Query: 84 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 284 L++ +P+HV +IMDGN RWA++RG+P GH+AGV ++RE++ C G+K LT++AFS +NW RP Sbjct: 13 LDKTRLPQHVGIIMDGNGRWAQKRGMPRVYGHKAGVNAVREVIRSCRELGIKYLTLYAFSTENWKRP 79
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: DDPS4_ARATH (Dehydrodolichyl diphosphate synthase 4 OS=Arabidopsis thaliana GN=At5g58782 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.346e-15 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = -2 Query: 87 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVR 284 L RE MPRHVAVIMDGN RWA+Q GL +S G+EAG + L E +LC + G+ ++ FAFS +NW R Sbjct: 52 LQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWGR 117
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_AQUAE (Undecaprenyl pyrophosphate synthetase OS=Aquifex aeolicus GN=uppS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.296e-15 Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = -2 Query: 84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269 +P HVA+IMDGN RWARQRGLP AGH G +++E C G+K LT+FAFS +NW RP Sbjct: 5 LPEHVAIIMDGNGRWARQRGLPRVAGHYRGAEVAEDIIEYCIELGIKHLTLFAFSTENWNRP 66
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_PROMA (Undecaprenyl pyrophosphate synthetase OS=Prochlorococcus marinus GN=uppS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-15 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = -2 Query: 84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269 +P H+A+IMDGN RWA + LP + GH AGV +L++ + LC WG+ VLTV+AFS +NW RP Sbjct: 27 LPEHIAIIMDGNGRWANAKKLPRAMGHSAGVDALKQTLRLCNDWGIGVLTVYAFSTENWSRP 88
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_NEIG1 (Undecaprenyl pyrophosphate synthetase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=uppS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.916e-15 Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = -2 Query: 84 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 284 L A+PRH+AVIMDGN RWA++R LP GH+ G+ +L +V+ C + GV+ LTVFAFS +NW RP Sbjct: 9 LEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAFSTENWRRP 75
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_CLOAB (Undecaprenyl pyrophosphate synthetase OS=Clostridium acetobutylicum GN=uppS PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.114e-15 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = -2 Query: 84 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 284 +N +P+H+A+IMDGN RWA++R LP + GH+AG +L+ +V C GVK LTV+ FS +NW+RP Sbjct: 19 INFSNIPKHIAIIMDGNGRWAKKRNLPRTMGHKAGGEALKRIVRECSDIGVKYLTVYGFSTENWIRP 85
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: DDPS1_ARATH (Dehydrodolichyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=DPS PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.114e-15 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = -2 Query: 87 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVR 284 L RE MPRHVA I+DGN RWA++ GL +S GHEAG + L ++ ELC GV ++ FAFS +NW R Sbjct: 65 LQRELMPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWGR 130
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_PROMP (Undecaprenyl pyrophosphate synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=uppS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.679e-15 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = -2 Query: 84 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 284 L++E +P H+A+IMDGN RWA ++GLP S GH GV L+E+++ KVLTV+AFS +NW+RP Sbjct: 18 LDKERIPEHIAIIMDGNGRWATKKGLPRSFGHNKGVSVLKEIIKASKNIDCKVLTVYAFSTENWIRP 84 The following BLAST results are available for this feature:
BLAST of CK938655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938655 ID=CK938655; Name=CK938655; organism=Citrus sinensis; type=EST; length=777bpback to top |