CK938655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_SHEON (Undecaprenyl pyrophosphate synthetase OS=Shewanella oneidensis GN=uppS PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.315e-14 Identity = 40/92 (43.48%), Postives = 61/92 (66.30%), Query Frame = -2 Query: 9 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP*VKQLALDRSPFF*SLTQNCCLXXK 284 L ++++P+HVA+IMDGN RWA+ +G P GH+AGV+++R V + G++ LT+FAFS +NW RP K+++L FF L + L K Sbjct: 31 LVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLFAFSSENWRRP-DKEVSLLMELFFTVLQREIKLLDK 121
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_LACLA (Undecaprenyl pyrophosphate synthetase OS=Lactococcus lactis subsp. lactis GN=uppS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.329e-14 Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = -2 Query: 84 EAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 275 E +P H+ +IMDGN RWA+Q+G P GH+AG+ SL+++ R G+KV+TV+AFS +NW RP Sbjct: 12 ELLPEHIGIIMDGNGRWAKQKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWTRP 75
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_XANAC (Undecaprenyl pyrophosphate synthetase OS=Xanthomonas axonopodis pv. citri GN=uppS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.654e-14 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = -2 Query: 84 AMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 272 A+PRH+A+IMDGN RWA++R P GH AG R++ ++ C GV LT+FAFS +NW RP Sbjct: 13 AVPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRP 75
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_AQUPY (Undecaprenyl pyrophosphate synthetase OS=Aquifex pyrophilus GN=uppS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.654e-14 Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = -2 Query: 84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269 +P HVA+IMDGN RWAR+RGLP AGH G ++VE G+K LT+FAFS +NW RP Sbjct: 5 IPEHVAIIMDGNGRWARKRGLPRIAGHYKGAEVAEDIVEFAIELGIKHLTLFAFSTENWNRP 66
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_VIBCH (Undecaprenyl pyrophosphate synthetase OS=Vibrio cholerae GN=uppS PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.385e-14 Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = -2 Query: 84 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 284 L+++ +P+H+AVIMDGN RWA+ +G P GH+ GV ++R+ + R G+K +T+FAFS +NW RP Sbjct: 6 LSQDVLPKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRRP 72
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_RHILO (Undecaprenyl pyrophosphate synthetase OS=Rhizobium loti GN=uppS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.385e-14 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = -2 Query: 84 PRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 266 P HVA+IMDGN RWA+ RG+P AGH AGV +LR+ V G+ LTV+AFS +NW RP Sbjct: 4 PAHVAIIMDGNGRWAKARGMPRLAGHRAGVEALRKTVRAAPDLGISFLTVYAFSSENWSRP 64
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_FUSNN (Undecaprenyl pyrophosphate synthetase OS=Fusobacterium nucleatum subsp. nucleatum GN=uppS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.645e-14 Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = -2 Query: 84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269 +P+H+A+IMDGN RWA++RGL S GH G ++LR+ +E GVK LTV+AFS +NW RP Sbjct: 5 IPKHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFSTENWNRP 66
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_BACTN (Undecaprenyl pyrophosphate synthetase OS=Bacteroides thetaiotaomicron GN=uppS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.645e-14 Identity = 31/67 (46.27%), Postives = 49/67 (73.13%), Query Frame = -2 Query: 84 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 284 +++ +P+H+A+IMDGN RWA+QRG + GH+AG ++ +++E R GVK LT++ FS +NW RP Sbjct: 7 IDKNRIPQHIAIIMDGNGRWAKQRGKERTYGHQAGAETVHKIIEDAARLGVKYLTLYTFSTENWNRP 73
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS2_BRAJA (Undecaprenyl pyrophosphate synthetase 2 OS=Bradyrhizobium japonicum GN=uppS2 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.260e-13 Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = -2 Query: 84 NREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 281 +R P HVA+IMDGN RWA RGLP + GH GV +LR +V G++ LT+F+FS +NW RP Sbjct: 13 DRSDAPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASHELGIRYLTIFSFSSENWSRP 78
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_XANOR (Undecaprenyl pyrophosphate synthetase OS=Xanthomonas oryzae pv. oryzae GN=uppS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.645e-13 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = -2 Query: 84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269 +PRH+A+IMDGN RWA++R P GH AG R++ ++ C GV LT+FAFS +NW RP Sbjct: 15 VPRHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRP 76 The following BLAST results are available for this feature:
BLAST of CK938655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938655 ID=CK938655; Name=CK938655; organism=Citrus sinensis; type=EST; length=777bpback to top |