CK938655

Overview
NameCK938655
Unique NameCK938655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_THEMA (Undecaprenyl pyrophosphate synthetase OS=Thermotoga maritima GN=uppS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.066e-12
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = -2 
Query:   84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269
            +P+HVA+IMDGN RWA++RGLP   GH+ G   L   V+     G+K LT F+FS +NW RP
Sbjct:    3 IPQHVAIIMDGNGRWAKKRGLPRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENWKRP 64
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_STAS1 (Undecaprenyl pyrophosphate synthetase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=uppS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.066e-12
Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = -2 
Query:   84 LNREAMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 284
            L+   +P HVA+IMDGN RWA+QR LP   GH  G+++++++ ++    G+K LT++AFS +NW RP
Sbjct:   20 LDLHNIPEHVAIIMDGNGRWAKQRKLPRIKGHYQGMQTVKKITKVASDIGIKYLTLYAFSTENWTRP 86
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_BACHK (Undecaprenyl pyrophosphate synthetase OS=Bacillus thuringiensis subsp. konkukian GN=uppS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.066e-12
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = -2 
Query:   84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269
            +P H+A+IMDGN RWA++R +P  AGH  G++ ++++ +   +  VKVLT++AFS +NW RP
Sbjct:   29 IPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRP 90
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_BACCR (Undecaprenyl pyrophosphate synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=uppS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.066e-12
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = -2 
Query:   84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269
            +P H+A+IMDGN RWA++R +P  AGH  G++ ++++ +   +  VKVLT++AFS +NW RP
Sbjct:   29 IPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRP 90
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_BACC1 (Undecaprenyl pyrophosphate synthetase OS=Bacillus cereus (strain ATCC 10987) GN=uppS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.066e-12
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = -2 
Query:   84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269
            +P H+A+IMDGN RWA++R +P  AGH  G++ ++++ +   +  VKVLT++AFS +NW RP
Sbjct:   29 IPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRP 90
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_BACAN (Undecaprenyl pyrophosphate synthetase OS=Bacillus anthracis GN=uppS PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.066e-12
Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = -2 
Query:   84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269
            +P H+A+IMDGN RWA++R +P  AGH  G++ ++++ +   +  VKVLT++AFS +NW RP
Sbjct:   29 IPEHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRP 90
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_STRP8 (Undecaprenyl pyrophosphate synthetase OS=Streptococcus pyogenes serotype M18 GN=uppS PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -2 
Query:   84 AMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 272
            ++P+H+ +IMDGN RWA++R  P   GH+AG+ +L+E+       GVKVLTV+AFS +NW RP
Sbjct:   15 SIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSRP 77
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_STRP6 (Undecaprenyl pyrophosphate synthetase OS=Streptococcus pyogenes serotype M6 GN=uppS PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -2 
Query:   84 AMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 272
            ++P+H+ +IMDGN RWA++R  P   GH+AG+ +L+E+       GVKVLTV+AFS +NW RP
Sbjct:   15 SIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSRP 77
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_STRP1 (Undecaprenyl pyrophosphate synthetase OS=Streptococcus pyogenes serotype M1 GN=uppS PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -2 
Query:   84 AMPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 272
            ++P+H+ +IMDGN RWA++R  P   GH+AG+ +L+E+       GVKVLTV+AFS +NW RP
Sbjct:   15 SIPKHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSRP 77
[Close]
BLAST of CK938655 vs. ExPASy Swiss-Prot
Match: UPPS_ACIAD (Undecaprenyl pyrophosphate synthetase OS=Acinetobacter sp. (strain ADP1) GN=uppS PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = -2 
Query:   84 MPRHVAVIMDGNVRWARQRGLPSSAGHEAGVRSLRELVELCCRWGVKVLTVFAFSYDNWVRP 269
            +P+HVA+IMDGN R+A++  +    GH  G  SL  +VE CC  GV+ LTVFAFS +NW RP
Sbjct:    9 LPKHVAIIMDGNNRFAKKNQMQKGDGHREGKNSLDPIVEHCCTRGVQALTVFAFSSENWNRP 70
The following BLAST results are available for this feature:
BLAST of CK938655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
UPPS_THEMA1.066e-1251.61Undecaprenyl pyrophosphate synthetase OS=Thermotog... [more]
UPPS_STAS11.066e-1246.27Undecaprenyl pyrophosphate synthetase OS=Staphyloc... [more]
UPPS_BACHK1.066e-1246.77Undecaprenyl pyrophosphate synthetase OS=Bacillus ... [more]
UPPS_BACCR1.066e-1246.77Undecaprenyl pyrophosphate synthetase OS=Bacillus ... [more]
UPPS_BACC11.066e-1246.77Undecaprenyl pyrophosphate synthetase OS=Bacillus ... [more]
UPPS_BACAN1.066e-1246.77Undecaprenyl pyrophosphate synthetase OS=Bacillus ... [more]
UPPS_STRP81.819e-1250.79Undecaprenyl pyrophosphate synthetase OS=Streptoco... [more]
UPPS_STRP61.819e-1250.79Undecaprenyl pyrophosphate synthetase OS=Streptoco... [more]
UPPS_STRP11.819e-1250.79Undecaprenyl pyrophosphate synthetase OS=Streptoco... [more]
UPPS_ACIAD1.819e-1253.23Undecaprenyl pyrophosphate synthetase OS=Acinetoba... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_H07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938655 ID=CK938655; Name=CK938655; organism=Citrus sinensis; type=EST; length=777bp
GGGGGTGGCTTTANNNTTAAGCAACAATTTTGCGTTAAAGATTAAAAAAA
GGGGGAACGGTCGAGAGCCAACTGCTTCACCTAAGGCCGAACCCAGTTAT
CATAAGAGAAAGCAAAAACGGTTAAAACTTTAACTCCCCATCGACAGCAA
AGCTCCACAAGCTCTCTCAAAGACCGTACGCCCGCCTCGTGTCCCGCAGA
GGACGGCAACCCTCGCTGCCGGGCCCACCTCACGTTGCCGTCCATTATGA
CCGCCACGTGTCTCGGCATCGCCTCCCTATTTAGTCCACCGGCAACTCCT
CCTCCTCCAGAGACAAATCTGAAATCCTCTCATTCGGACGCCGCCGCCGC
TGCTGCTCATTTTCCTTGACGGCAACTTCCGCGGAGCTCCCTCGAGCTCC
AACCTTGCGAAGAGAAAACGGAGGTGTGATGCGGGTTTGGGAGCGCGAAG
GATTGAGTTTCGGAGCAAAGAGAGTGTTTGGAACTGGAGAATTCACGTGC
AAGGATAACATTGTTCCGGTTTAAGCTAAGCCTTTTAGCGATGAACTAAC
TTGTCGTTTATTCTTCTTCTTCTTCTTCTTCTTCTTGATTTTCAGTTATT
CAGTTGTTGTTGCTGTTATATACTTGCCGCCACCTATGGCATTGATTTTG
ACTAGCTTGCCTACGGTGAAACGGAAGCGTTCTGAGCCTCGAGATTTTTA
GTGGACTGTGGACAAGCAGAGCGATGGAGGAGCAACGACATGAAACTTAG
TCGACTAGTTGCTCTCGCGGATAACTC
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