CK938654
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938654 vs. ExPASy Swiss-Prot
Match: YAD3_SCHPO (Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces pombe GN=SPAC4G8.03c PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.371e-23 Identity = 56/170 (32.94%), Postives = 104/170 (61.18%), Query Frame = 1 Query: 22 DQVVTLSTHPYGCRVIQRILEHCKDSKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGKPHERSIIIEELAGKIVQMSQQKFASNVVEKCLTFGGPNERQLLVDEMLGSTDENEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARV 531 + ++TL+T+ +GC ++QR L+ + Q ++++ I+ S +L Q+ YGNY+VQHVLE IIE+ G I ++S QKF+SN +E+C+ P+ R+ ++ E L + ++ ++ D +ANYV+Q+ L ++ Q+ LIL I + ++ +G+HI+A++ Sbjct: 610 ENLITLATNRHGCCILQRCLDRT-NGDIQERLVNSIIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQMLQEFLSFPN----IEQLLDDCYANYVMQRFLNVADESQKFLILRSISHVIPKIQNTRHGRHILAKL 774
BLAST of CK938654 vs. ExPASy Swiss-Prot
Match: MPF1_SCHPO (Meiotic PUF family protein 1 OS=Schizosaccharomyces pombe GN=mpf1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19 Identity = 55/171 (32.16%), Postives = 94/171 (54.97%), Query Frame = 1 Query: 37 LSTHPYGCRVIQRILEHCKDSKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGKPHERSIIIEELAGKIVQMSQQKFASNVVEKCLTFGGPNERQLLVDEMLGSTDENEP----LQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 537 +S G V+Q I E+CK+ K + +DEI+ ++ + Q+GN+V+QH++EHG ++ I+ L ++ S ++AS VVE+ L V E+ +T +NE LQ + +Q+ NY+VQ +L+ Q L+ +K H+ +L+ + YG+ I A VEK Sbjct: 411 VSVSEMGSLVVQTIFENCKE-KDKRTCLDEIINNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYASKVVERALRVCHVTFFDRYVKEI--TTPQNELPTIFLQEIASNQYGNYIVQYLLQVATPSQINLMAEHLKKHMVSLRGHKYGQRIAALVEK 578
BLAST of CK938654 vs. ExPASy Swiss-Prot
Match: MCP2_SCHPO (Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe GN=mcp2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.675e-19 Identity = 48/163 (29.45%), Postives = 99/163 (60.74%), Query Frame = 1 Query: 55 GCRVIQRILEHCKDSKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGKPHERSIIIEELAGKIVQMSQQKFASNVVEKCLTFGGPNERQLLVDEMLGSTDE--NEPLQAMMKDQFANYVVQKVLETCEDQQRELILSRIKVHLNALKKYTYGKHIVARVEK 537 G V+Q + E+C + K + + ++EI+ + +A+ Q+GN+VVQH++E+G+ + +I+ L + V+ S +FAS V+EK + G N L + ++ + + +PL + DQ+ NY++Q++++ + ++ L+++ IK H+ +L+ YG+ + VEK Sbjct: 523 GSLVVQNMFENCVE-KDKRECIEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAVEFSIDQFASKVIEKAIKSGPKNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQQIIQLGQPAEKNLVITHIKKHMVSLRGSKYGQKVAYLVEK 684
BLAST of CK938654 vs. ExPASy Swiss-Prot
Match: PUF4_YEAST (Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae GN=PUF4 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 55/175 (31.43%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 22 DQVVTLSTHPYGCRVIQRILEHCKDSKTQSKVMDEILGSVSMLAQDQYGNYVVQHVL----EHGKPHERSIIIEELAGKIVQMSQQKFASNVVEKCLTFGGPNERQLLVDEMLGSTDENEPLQAMMKDQFANYVVQKVLETCEDQQRELI--LSRIKVHL--NALKKYTYGKHIV 522 D + ++TH +GC V+QR L+H + + + D++L V L D +GNYVVQ+++ E K I+ L + +++S KF SNV+EK L +E +L E+L + E +Q+++ D + NYV+Q L+ Q L LS I L ++ +GK I+ Sbjct: 711 DSCIDIATHRHGCCVLQRCLDHGTTEQCDN-LCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAIVSEPMIL--EILNNGGET-GIQSLLNDSYGNYVLQTALDISHKQNDYLYKRLSEIVAPLLVGPIRNTPHGKRII 881 HSP 2 Score: 70.0922 bits (170), Expect = 1.572e-11 Identity = 42/182 (23.08%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 31 VTLSTHPYGCRVIQRILEHCKDSKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGKPHERSIIIEELAGKIVQMSQQKFASNVVEKCLTFGGPNERQLLVDEMLGSTDENEPLQAMMKDQFANYVVQKVLETCEDQQR----ELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRI 564 V +S +P+G R +Q+++E K + V+D + L++D GN+V+Q L+ KP I + ++ + ++ + V+++CL G + L D++L D+ + D F NYVVQ ++ ++ + I+ +K L + +G +++ ++ K E I Sbjct: 641 VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVDK------LTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAIVSEPMI 816 The following BLAST results are available for this feature:
BLAST of CK938654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938654 ID=CK938654; Name=CK938654; organism=Citrus sinensis; type=EST; length=783bpback to top |