CK938651

Overview
NameCK938651
Unique NameCK938651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_AEDAE (60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.122e-37
Identity = 76/138 (55.07%), Postives = 102/138 (73.91%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPN-QKKSEKKPPAGHKRYNLKKLTYEERKARLVE 414
            DVGL +TTTG R+FGA+KG++DGGL+IPHS KRF G+S ++K  +AEVHR +I+G HVA YMRTL E++ + Y+  F +Y+  GI+AD++E +YK  HA IR DP   KK EKK     KR+NL KLT E RKA++ +
Sbjct:  147 DVGLARTTTGARIFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEVHRAHIFGQHVADYMRTLEEEDEDAYKRQFSKYIALGIKADDIETIYKNAHAGIRKDPAFHKKPEKK--VTKKRFNLAKLTLEARKAKIAK 282          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5B_XENLA (60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-B PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.176e-37
Identity = 70/138 (50.72%), Postives = 100/138 (72.46%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVER 417
            D GL +TTTGN+VFGALKG++DGGL IPHS KRF G+  +SK+ + EVHRK+I+  ++A YMR LME++ + Y+  F +Y+K G+ AD LE++YKK HA IR +P  +K  KK     KR+N  KL+ E++K R+ ++
Sbjct:  147 DAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDAYKKQFSQYIKNGVAADQLEDIYKKAHAGIRENPVHEKKPKK-EVKKKRWNRAKLSLEQKKDRVAQK 283          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5A_XENLA (60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-A PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.176e-37
Identity = 71/138 (51.45%), Postives = 100/138 (72.46%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVER 417
            D GL +TTTGN+VFGALKG++DGGL IPHS KRF G+  +SK+ + EVHRK+I+  +VA YMR LME++ + Y+  F +Y+K G+ AD +E+LYKK HA IR +P  +K  KK     KR+N  KL+ E++K R+ ++
Sbjct:  147 DAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDAYKKQFSQYIKNGVTADQVEDLYKKAHAGIRENPVHEKKPKK-EVKKKRWNRAKLSLEQKKDRVAQK 283          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.053e-36
Identity = 66/141 (46.81%), Postives = 105/141 (74.47%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVERLKA 426
            DVGL +TTTGNRVF A+KG++DGG+DIPHS  RF G+ ++S QL+A+  R+YI+GGHV+ YM+ L E++ EKY++HF  ++K GI AD++E++Y+  HA IRA+P  +K + +     KR+N  K++ ++++ R+ ++  A
Sbjct:  147 DVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRFVGYDEESSQLEADKLRQYIFGGHVSDYMKYLQEEDEEKYKAHFSRFIKEGITADSMEQMYRDAHAKIRANPAHEKKQPRDGLVKKRWNRAKMSLKQKRDRVKQKKAA 287          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 1.376e-36
Identity = 73/139 (52.52%), Postives = 100/139 (71.94%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGH-KRYNLKKLTYEERKARLVER 417
            DVGL +TTTG +VFGA+KG+ DGGLDIPHS KRF G+  +S    AEVHR +I+GGHV+ YM+ L E++ E ++  F +Y+K G+ AD +EE+Y K HAAIR DP  KK  K   AG  KR+N KK+T+ +R+ R+ ++
Sbjct:  147 DVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPTPKK--KTDFAGKTKRWNRKKMTFSQRRDRVKQK 283          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_NEUCR (60S ribosomal protein L5 OS=Neurospora crassa GN=rpl-5 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.376e-36
Identity = 76/151 (50.33%), Postives = 103/151 (68.21%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKP-------PAGHKRYNLKKLTYEERKARLVERLKALNA 435
            DVGL +T+TG RVFGA+KG+ DGG+ IPHSE RF G+  +S++LDAE  +KYI+GGHVA YM TL +D+ E+Y+S F  Y++  +EAD LE+LY + HAAIR DP +K   + P        A   +Y   KLT E+R A + ER+ AL +
Sbjct:  150 DVGLARTSTGARVFGAMKGASDGGIFIPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDPFKKAESEAPKKTKEEWKAESLKYKKSKLTREQRAAGVQERIAALRS 300          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_TOXCI (60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.347e-36
Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGH-KRYNLKKLTYEERKARLVE 414
            DVGL+KT+TG RVFGA+KG++DGG +IPHS KRF G+  ++K+  AE HRK+I G HVA YMR L E++ + +   F +Y+K GI AD+LE +YKK H  IR+DP + +  KK  +   KR+N KKLT  ERK R+VE
Sbjct:  147 DVGLMKTSTGARVFGAMKGAVDGGFNIPHSVKRFPGYDAEAKEYSAETHRKHILGLHVAEYMRKLEEEDEDAFNRQFSQYIKLGIVADDLENMYKKAHENIRSDPKRDRKPKKDVSKEPKRWNAKKLTNAERKQRVVE 284          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_DUNSA (60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.003e-36
Identity = 70/122 (57.38%), Postives = 93/122 (76.23%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYN 369
            D GL +T+TG++VF A+KG+LDGGLDIPH+EKRF G++   K+LD EV +KYIYGGHVA Y  T+ E+EPEKYQ+HF  YV+  IE D +E++YK+VHA IR +P   K E+  PA  KR++
Sbjct:  147 DTGLKRTSTGSKVFAAMKGALDGGLDIPHNEKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVENEIEPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWS 266          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_HELAN (60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.917e-36
Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARL----VERLKALNA 435
            DVGL++TTTG RVFGA+KG++DGGL+I HS KRF GF  +SK+ +A+VHR++I+G HVA YMR L E++ E Y+  F +Y+K G+ AD +E LYKK H AIRA+P +K   KK     KR+  KKLT E+R+ ++     E LK + A
Sbjct:  147 DVGLMRTTTGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEAYKRQFSQYIKLGLNADAIEGLYKKAHEAIRANPARKTVAKKAHP-KKRWTEKKLTREQRQGKVAAAKAEWLKKIEA 293          
BLAST of CK938651 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.165e-35
Identity = 70/138 (50.72%), Postives = 99/138 (71.74%), Query Frame = 1
Query:    4 DVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYVKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAGHKRYNLKKLTYEERKARLVER 417
            D GL +TTTGN+VFGALKG++DGGL IPHS KRF G+  +SK+ +AEVHRK+I G +VA YMR LME++ + Y+  F +Y+K  +  D +EE+YKK HAAIR +P  +K  KK     KR+N  K++  ++K R+ ++
Sbjct:  147 DAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKK-EVKKKRWNRPKMSLAQKKDRVAQK 283          
The following BLAST results are available for this feature:
BLAST of CK938651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
RL5_AEDAE2.122e-3755.0760S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 ... [more]
RL5B_XENLA6.176e-3750.7260S ribosomal protein L5-B OS=Xenopus laevis GN=rp... [more]
RL5A_XENLA6.176e-3751.4560S ribosomal protein L5-A OS=Xenopus laevis GN=rp... [more]
RL5_SUBDO1.053e-3646.8160S ribosomal protein L5 OS=Suberites domuncula GN... [more]
RL5_STYCL1.376e-3652.5260S ribosomal protein L5 OS=Styela clava GN=RPL5 P... [more]
RL5_NEUCR1.376e-3650.3360S ribosomal protein L5 OS=Neurospora crassa GN=r... [more]
RL5_TOXCI2.347e-3653.6260S ribosomal protein L5 OS=Toxoptera citricida GN... [more]
RL5_DUNSA4.003e-3657.3860S ribosomal protein L5 OS=Dunaliella salina GN=R... [more]
RL5_HELAN8.917e-3652.0360S ribosomal protein L5 OS=Helianthus annuus GN=R... [more]
RL5_MACFA1.165e-3550.7260S ribosomal protein L5 OS=Macaca fascicularis GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_B02 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938651 ID=CK938651; Name=CK938651; organism=Citrus sinensis; type=EST; length=663bp
GGGGATGTTGGTCTTGTGAAAACAACTACTGGTAACCGTGTCTTTGGCGC
TCTTAAGGGTTCATTGGATGGTGGACTTGATATCCCTCACAGTGAGAAGA
GATTTGCTGGATTCAGTAAGGATAGTAAGCAACTTGATGCTGAAGTTCAC
CGTAAATACATCTATGGTGGTCATGTTGCTGCCTACATGAGGACTTTGAT
GGAAGATGAGCCAGAGAAGTACCAGTCTCACTTTTGTGAATACGTCAAGA
GAGGTATTGAGGCTGATAACCTTGAAGAGTTGTACAAGAAGGTACATGCT
GCCATCCGTGCAGACCCTAACCAGAAGAAATCTGAGAAGAAGCCTCCAGC
AGGGCACAAGAGGTACAACCTGAAGAAACTTACGTATGAGGAAAGGAAAG
CCAGGTTAGTTGAAAGGTTGAAAGCACTCAATGCTGCTGAAGATGATGAA
GACGATGAGTGAATGCGATACTAGGAAGTTTTTGTTTCTTAGTTCAATAG
GTTATTTTCAGAGATTACTAAAATTAAAGAACCTGGCTTGTTTGATAGGT
TGAGAACAGTGTTGTTTCTATGAGCTTTCAAATGCCGATGAGACCTGGTT
GTTTGCTGAAATTCCAGTATTTCAATCTTTTGTAGAAAAAAAAAAAAAAA
AAAAAAAAAAAAA
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