CK938644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_PIG (60S ribosomal protein L35 OS=Sus scrofa GN=RPL35 PE=2 SV=3) HSP 1 Score: 156.762 bits (395), Expect = 9.213e-38 Identity = 77/122 (63.11%), Postives = 102/122 (83.61%), Query Frame = 2 Query: 62 MARVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 MA++K +LR K K +LL QL+DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLEDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKFAVK 122
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_OPHHA (60S ribosomal protein L35 OS=Ophiophagus hannah GN=RPL35 PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.052e-37 Identity = 78/122 (63.93%), Postives = 99/122 (81.15%), Query Frame = 2 Query: 62 MARVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 MA++K +LR K K +LL QL DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ LKT++++++E +P RKYA+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEEGLKTKKQQRKERLYPPRKYAVK 122
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_HIPCM (60S ribosomal protein L35 OS=Hippocampus comes GN=rpl35 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.269e-36 Identity = 75/122 (61.48%), Postives = 101/122 (82.79%), Query Frame = 2 Query: 62 MARVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 MA++K +LR K K +LL QL DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ SL+T++++++++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVITQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEESLRTKKQQRKDLLYSIRKFAVK 122
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_XENTR (60S ribosomal protein L35 OS=Xenopus tropicalis GN=rpl35 PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 6.602e-36 Identity = 75/122 (61.48%), Postives = 98/122 (80.33%), Query Frame = 2 Query: 62 MARVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 MA++K +LR K K +LL QL DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ L+T+++++++ F RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRALRRRLNKHEEGLRTKKQQRKDRLFSARKFAVK 122
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_DANRE (60S ribosomal protein L35 OS=Danio rerio GN=rpl35 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 3.277e-35 Identity = 75/122 (61.48%), Postives = 98/122 (80.33%), Query Frame = 2 Query: 62 MARVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 MA++K +LR K K +LL QL DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRAIRR+LTKH+ +L T++ +++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAIRRQLTKHEENLMTKKMQRKSRLYSIRKFAVK 122
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_ICTPU (60S ribosomal protein L35 OS=Ictalurus punctatus GN=rpl35 PE=2 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.245e-34 Identity = 74/122 (60.66%), Postives = 96/122 (78.69%), Query Frame = 2 Query: 62 MARVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 MA++K +LR K K +LL + DLK EL+ LRVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRP+KTRAIRR+LTKH+ L T++ ++R + MRK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKHVDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRAIRRQLTKHEQGLMTKKMQRRSRLYSMRKFAVK 122
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_PLAFE (60S ribosomal protein L35 OS=Platichthys flesus GN=rpl35 PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34 Identity = 72/122 (59.02%), Postives = 99/122 (81.15%), Query Frame = 2 Query: 62 MARVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 MA++K +LR K K +LL QL DLK E + LRVAKVTGGA +KL+KI VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRP+KTRA+RRRL KH+ SL+T++++++++ + +RK+A+K Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKNEPSQLRVAKVTGGAASKLTKICVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPRKTRALRRRLNKHEESLRTKKQQRKDLLYSIRKFAVK 122
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_SCHPO (60S ribosomal protein L35 OS=Schizosaccharomyces pombe GN=rpl35 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.554e-32 Identity = 68/119 (57.14%), Postives = 92/119 (77.31%), Query Frame = 2 Query: 71 VKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 +K ELR +S+ +L QL++L+ ELA LRV K+ GG+ +KLSKIK R IA++LTVI++ + A REAYKNKK++PLDLR KKTRAIRR LT ++ S KT ++ K+E YFP+RKYA+K Sbjct: 3 LKTFELRKQSQENLAEQLQELRQELASLRVQKIAGGSGSKLSKIKTTRKDIARILTVINESNRLAAREAYKNKKYIPLDLRQKKTRAIRRALTPYEQSRKTLKQIKKERYFPLRKYALK 121
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_YEAST (60S ribosomal protein L35 OS=Saccharomyces cerevisiae GN=RPL35A PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.687e-29 Identity = 71/122 (58.20%), Postives = 92/122 (75.41%), Query Frame = 2 Query: 62 MARVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 MA VK +ELRTKSK L +QL DLK ELA L+V K++ + L KIK VR SIA VLTVI+++Q+ A+R+ YK KK+ P DLR KKTRA+RR LTK +AS TE+++K+++ FP RKYAIK Sbjct: 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPS---LPKIKTVRKSIACVLTVINEQQREAVRQLYKGKKYQPKDLRAKKTRALRRALTKFEASQVTEKQRKKQIAFPQRKYAIK 119
BLAST of CK938644 vs. ExPASy Swiss-Prot
Match: RL35_WHEAT (60S ribosomal protein L35 OS=Triticum aestivum GN=RPL35 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.602e-27 Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 2 Query: 68 RVKVHELRTKSKTDLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 427 +VK EL KSK DL QL +LK EL LR+ KV +KL++I +R SIA+VLTVI+ KQ+A LR YKNKK+ PLDLR K+TRAIRRRL+ + S E+ KKR ++FP RK+AIK Sbjct: 5 KVKAGELWNKSKDDLTKQLAELKTELGQLRIQKVASSG-SKLNRIHDIRKSIARVLTVINAKQRAQLRLFYKNKKYAPLDLRAKQTRAIRRRLSPDEKSRVLEKTKKRTVHFPQRKFAIK 123 The following BLAST results are available for this feature:
BLAST of CK938644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938644 ID=CK938644; Name=CK938644; organism=Citrus sinensis; type=EST; length=651bpback to top |