CK938642

Overview
NameCK938642
Unique NameCK938642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_ACIBL (Catalase-peroxidase OS=Acidobacteria bacterium (strain Ellin345) GN=katG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 69/239 (28.87%), Postives = 92/239 (38.49%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------PEGR----------------------------------LPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCHKE------------------------------------RSGFEGPWTNNPLIFDNSYF 688
            H  P  +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL PIKQ++   LS+AD   LAG VA+E  G     F  GR D  +P       PEG+                                   P+    +  +R+ F  M ++D++ V L +GGHT G+ H                                       SG EG WT NP+ +DN +F
Sbjct:  101 HYGPFFIRMAWHSAGTYRIGDGRGGAGSGEQRFAPLNSWPDNGNLDKARRLLWPIKQKYGRKLSWADLMVLAGNVALESMGFKTFGFAGGREDVWEPSEDIYWGPEGKWLDDKRYSGERDLENPLGAVQMGLIYVNPEGPNGKPDPAAAAVDIRETFARMAMNDEETVALIAGGHTFGKTHGAGVPTEYVGPEPEGAGIEEQGLGWKNKLGHGHGYHTITSGLEGAWTTNPIKWDNGFF 339          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_SACD2 (Catalase-peroxidase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=katG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 58/180 (32.22%), Postives = 84/180 (46.67%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNG-LDIAVRLLEPIKQQFPI-LSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----PEGRL----------------------------------PNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            H  P  +RL+WH+AGTY +    GG  G ++    L    +N  LD A RLL+PIKQ++   LS++D   LAG + +E  G P + F  GR D+ +P      PEG+                                   P+    +  +R  FG MG+SD++ V L +GGHT G+ H
Sbjct:   94 HYGPFFIRLSWHAAGTYRMIDGRGGADGGMQRFAPLNSWPDNASLDKARRLLQPIKQKYGNNLSWSDLLVLAGTIGMEDMGFPIVGFAFGRDDEWEPEEVNWGPEGQWLTDRRHSGDRKLDKPFGATEMGLIYVNPEGPHGNPDPIAAAHDIRQAFGRMGMSDEETVALIAGGHTFGKAH 273          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_FRASN (Catalase-peroxidase OS=Frankia sp. (strain EAN1pec) GN=katG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 67/238 (28.15%), Postives = 93/238 (39.08%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNT-KTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP--------------------------------------PEG--RLPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTNNPLIFDNSYF 688
            H  P ++R+AWHSAGTY ++  + GG  G  R     +   N  LD A RLL P+K+++   LS+AD   LAG VA+E  G     F  GR D  +P                                       PEG    P+    +  +R+ F  M + D++ V L +GGHT G+ H                                      SG EG WT  P+ +DNS+F
Sbjct:   98 HYGPFMIRMAWHSAGTYRISDGRGGGGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQALSWADLMILAGNVALESMGFTTFGFAGGREDVWEPDEDVYWGPETTWLGDERYTGDRELENPLGAVQMGLIYVNPEGPNGTPDPLAAARDIRETFRRMAMDDEETVALIAGGHTFGKTHGAGDPDNVGPEPEGAPLETQGLGWKNAFGTGKGADAITSGLEGAWTPTPVSWDNSFF 335          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_MARMM (Catalase-peroxidase OS=Maricaulis maris (strain MCS10) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.954e-13
Identity = 69/243 (28.40%), Postives = 97/243 (39.92%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDV-NTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQFPI-LSYADFYQLAGVVAVEVTG--------------GPEIPFHPG-----------------RPDKSDPP------------PEG--RLPNATKGSDHLRDVFGHMGLSDKDIVVLS-GGHTLGRCHKE-----------------------------------RSGFEGPWTNNPLIFDNSYF 688
            H   +++RLAWHSAG+Y + + + GG  G IR     +   N  LD A RLL P+K+++   +S+AD   LAG +A E  G              GPEI  + G                 +PD  + P            PEG    P+  K +  +R  F  M ++D++   L+ GGHT+G+ H                                      SG EG WT NP  FD  YF
Sbjct:   88 HYGGLMIRLAWHSAGSYRLADGRGGGGSGNIRFAPLNSWPDNGNLDKARRLLWPLKKKYGNKISWADLILLAGTIAYENMGLKTFGFGFGREDIWGPEIDTYWGAEKEWLAPSDTRYEDVAKPDTMENPLAAVQMGLIYVNPEGVNGKPDPLKTAAQVRTTFARMAMNDEETAALTAGGHTVGKTHGNGDAGALGPEPEGAELENQGFGWVNPNLGGKASNAVTSGLEGAWTTNPTQFDMGYF 330          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_ENT38 (Catalase-peroxidase OS=Enterobacter sp. (strain 638) GN=katG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 61/177 (34.46%), Postives = 83/177 (46.89%), Query Frame = 2
Query:  221 IILRLAWHSAGTY-DVNTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------------------------------------PEGRLPNAT----KGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            + +R+AWH AGTY  V+ + G   G  R     A   N  LD A RLL PIKQ++   +S+AD Y LAG VA+E +G     F  GR D  +P                                     PEG  PNA+      +  +R  FG+MG++D++ V L +GGHTLG+ H
Sbjct:   99 LFIRMAWHGAGTYRSVDGRGGAGRGQQRFAPLNAWPDNVSLDKARRLLWPIKQKYGQKISWADLYILAGNVALENSGFRTFGFGAGREDVWEPDMDVNWGDEKAWLTHRDPESLAKRPLAATEMGLIYVNPEG--PNASGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTH 273          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG1_HALMA (Catalase-peroxidase 1 OS=Haloarcula marismortui GN=katG1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 66/240 (27.50%), Postives = 92/240 (38.33%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDEL-AHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDP----------------------------------------PPEG--RLPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCHKE------------------------------------RSGFEGPWTNNPLIFDNSY 685
            H  P+ +R+AWHSAGTY      GG  G  +    L +   N  LD A RLL PIK+++   LS+AD   LAG  A+E  G     +  GR D  +P                                         PEG    P+    ++++R+ FG M ++D++   L +GGHT G+ H                                       SG EGPWT  P+ +DN Y
Sbjct:   82 HYGPLFIRMAWHSAGTYRTTDGRGGASGGRQRFAPLNSWPDNANLDKARRLLWPIKKKYGRKLSWADLIVLAGNHAIESMGLKTFGWAGGREDAFEPDEAVDWGPEDEMEAHQSERRTDDGELKEPLGAAVMGLIYVDPEGPNGNPDPLASAENIRESFGRMAMNDEETAALIAGGHTFGKVHGADDPEENLGDVPEDAPIEQMGLGWENDYGSGKAGDTITSGIEGPWTQAPIEWDNGY 321          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: APX4_SOLLC (Putative L-ascorbate peroxidase, chloroplastic OS=Solanum lycopersicum GN=CLEB3J9 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 55/160 (34.38%), Postives = 74/160 (46.25%), Query Frame = 2
Query:  218 PIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQFPI------LSYADFYQLAGVVAVEVT---------GG------------------PEIPFHPGRPDKSDPPPEGRLPNATKGS-DHLRDVFGHMGLSDKDIVVLS 595
            P +L LA + A TYD  TKTGGP G+IR   E++   N GLD A+ LLE  K+   +      +SYAD  Q A   AV+ T         GG                   +     GR D  +P PEGR+P   K S   ++D F  +GL  + + V+S
Sbjct:  110 PSLLTLALNDAITYDKATKTGGPNGSIRFSSEISRPENKGLDAALNLLEESKKVIDLDSKGGPISYADLIQFAAQSAVKSTFIASAISKCGGNVEKGTLLYSAYGSNGQWGQFDRIFGRSDAQEPDPEGRVPQWDKASVQEMKDKFKAVGLGPRQLAVMS 269          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_RHISN (Catalase-peroxidase OS=Rhizobium sp. (strain NGR234) GN=katG PE=3 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 65/220 (29.55%), Postives = 94/220 (42.73%), Query Frame = 2
Query:  119 MGKCYPKVGDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----PEGRL----------------------------------PNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            MGK +    +E++K  +E+ K+ L  L+ E          H   + +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL PIKQ++   +S+AD   L G VA+E  G     F  GR D  +P      PEG                                    P+    +  +R+ F  M ++D++ V L +GGHT G+ H
Sbjct:   46 MGKAF-NYAEEFKKLDLEELKKDLHALMTESQDWWPADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNRISWADLMILTGNVALESMGFQTFGFAGGRADVWEPQELFWGPEGTWLGDERYSGERQLDEPLAAVQMGLIYVNPEGPNGNPDPVAAAREIRETFARMAMNDEETVALIAGGHTFGKTH 264          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_BRASO (Catalase-peroxidase OS=Bradyrhizobium sp. (strain ORS278) GN=katG PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12
Identity = 55/181 (30.39%), Postives = 79/181 (43.65%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------PEGR----------------------------------LPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            H  P+ +R+AWH+AGTY +    GG   G  R     +   N  LD A RLL PIKQ++   +S+AD + L G VA+E  G     F  GR D  +P       PEG+                                   P+    +  +R+ F  M ++D++ V L +GGHT G+ H
Sbjct:   80 HYGPLFIRMAWHAAGTYRIGDGRGGAGTGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGQKISWADLFVLTGNVALESMGFKTFGFGGGRADTWEPEQDIYWGPEGKWLADERYSGDRELAGSLAAVQMGLIYVNPEGPNGKPDPAAAARDIRETFARMAMNDEETVALIAGGHTFGKTH 260          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_KLEP7 (Catalase-peroxidase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 59/177 (33.33%), Postives = 81/177 (45.76%), Query Frame = 2
Query:  221 IILRLAWHSAGTY-DVNTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------------------------------------PEGRLPNAT----KGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            + +R+AWH AGTY  V+ + G   G  R     +   N  LD A RLL P+KQ++   +S+AD Y LAG VA+E  G     F  GR D  +P                                     PEG  PNA+      +  +R  FG+M + D++IV L +GGHTLG+ H
Sbjct:   99 LFIRMAWHGAGTYRTVDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPVKQKYGQKISWADLYMLAGNVALENAGFRTFGFGAGREDVWEPDLDVDWGDEKEWLAHRHPESLAKQAIGATEMGLIYVNPEG--PNASGEPLSAAAAIRATFGNMAMDDEEIVALIAGGHTLGKTH 273          
The following BLAST results are available for this feature:
BLAST of CK938642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
KATG_ACIBL1.540e-1428.87Catalase-peroxidase OS=Acidobacteria bacterium (st... [more]
KATG_SACD22.627e-1432.22Catalase-peroxidase OS=Saccharophagus degradans (s... [more]
KATG_FRASN1.304e-1328.15Catalase-peroxidase OS=Frankia sp. (strain EAN1pec... [more]
KATG_MARMM4.954e-1328.40Catalase-peroxidase OS=Maricaulis maris (strain MC... [more]
KATG_ENT381.441e-1234.46Catalase-peroxidase OS=Enterobacter sp. (strain 63... [more]
KATG1_HALMA1.883e-1227.50Catalase-peroxidase 1 OS=Haloarcula marismortui GN... [more]
APX4_SOLLC1.883e-1234.38Putative L-ascorbate peroxidase, chloroplastic OS=... [more]
KATG_RHISN4.194e-1229.55Catalase-peroxidase OS=Rhizobium sp. (strain NGR23... [more]
KATG_BRASO4.194e-1230.39Catalase-peroxidase OS=Bradyrhizobium sp. (strain ... [more]
KATG_KLEP75.477e-1233.33Catalase-peroxidase OS=Klebsiella pneumoniae subsp... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_C01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938642 ID=CK938642; Name=CK938642; organism=Citrus sinensis; type=EST; length=790bp
GGGAGAAACACCCGCTNNNNNATCTTCAGCTCGTCACAGTTCAGTTCGGT
CATCGCATTCGACAGTAACTACTTAACAAGCCTCAAGCTGAGCTTCTTCT
TCTTCTTCTTTTTTCATCATGGGAAAGTGTTATCCAAAAGTGGGCGATGA
GTATCAGAAAGCAGTGGAGAAATGCAAGAGGAAACTCAGAGGACTCATTG
CTGAGAAACACTGTGCCCCTATCATTCTTCGCTTGGCATGGCACTCAGCG
GGGACTTATGACGTGAACACGAAGACAGGAGGGCCTTTTGGGACGATCAG
GCACCCAGATGAGCTTGCTCATGAGGCTAACAATGGTCTTGATATTGCTG
TCAGGCTCTTGGAGCCCATCAAGCAGCAGTTTCCTATCTTGTCCTACGCT
GATTTCTATCAGTTGGCTGGAGTTGTTGCCGTTGAAGTTACCGGAGGGCC
TGAAATACCTTTCCACCCTGGAAGACCGGACAAATCTGATCCGCCCCCAG
AAGGTCGCTTGCCAAATGCCACCAAAGGTTCTGACCATTTGAGAGATGTC
TTCGGCCACATGGGTCTGAGTGATAAGGATATTGTTGTTTTATCCGGCGG
TCATACATTGGGTAGGTGCCACAAGGAGCGTTCTGGATTTGAAGGACCCT
GGACTAACAATCCACTTATTTTTGACAATTCATATTTTAAGGAATTGCTG
AGTGGAGAGAAAGAAGGTCTACTTCAGCTGCCATCAGACAAGGCTCTTCT
CGAGGACCCAGTGTTTCGTCCTCTTGTTGAAAAATATGCT
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