CK938642

Overview
NameCK938642
Unique NameCK938642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_CLOBA (Catalase-peroxidase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 63/190 (33.16%), Postives = 85/190 (44.74%), Query Frame = 2
Query:  218 PIILRLAWHSAGTYDV-NTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP--------------------------------------PEGRLPNATK---GSDH-LRDVFGHMGLSDKDIVVL-SGGHTLGRCHKERS-GFEGP 649
            P  +R+AWHSAGTY V + + GG FG  R     +   N  LD A RLL PIK+++   +S+AD   L G  A+E  G   + F  GR D  +P                                       PEG  PN      GS H +R+ F  M ++D++ V L +GGHT G+CH   S  + GP
Sbjct:   88 PFFIRMAWHSAGTYRVGDGRGGGSFGLQRFAPLNSWPDNINLDKARRLLWPIKKKYGNKISWADLMILTGNCALESMGLKTLGFGGGRVDVWEPQEDIYWGSEKEWLGDEREKDDEELENPLAAVQMGLIYVNPEG--PNGNPDPLGSAHDVRETFARMAMNDEETVALVAGGHTFGKCHGAASPSYVGP 275          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_BRASB (Catalase-peroxidase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 55/181 (30.39%), Postives = 79/181 (43.65%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------PEGRL----------------------------------PNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            H  P+ +R+AWH+AGTY +    GG   G  R     +   N  LD A RLL PIKQ++   +S+AD + L G VA+E  G     F  GR D  +P       PEG+                                   P+    +  +R+ F  M ++D++ V L +GGHT G+ H
Sbjct:   80 HYGPLFIRMAWHAAGTYRIGDGRGGAGTGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGQKISWADLFVLTGNVALESMGFKTFGFGGGRADTWEPEQDIYWGPEGKWLADERYSGDRELAGSLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTH 260          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_PSYIN (Catalase-peroxidase OS=Psychromonas ingrahamii (strain 37) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 69/243 (28.40%), Postives = 94/243 (38.68%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTG--------GPEIPFHP------------------------GRPDKSDP-----------PPEG--RLPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTNNPLIFDNSYF 688
            H   +++RL+WH+AGTY +    GG   G  R     +   N  LD A RLL PIK+++   LS+AD    AG +A E  G        G E  +HP                        G  D  +P            PEG    P+  K +  +R  F  M ++D++ V L +GGHT+G+CH                                      SG EG WT NP  +DN YF
Sbjct:   88 HYGGLMIRLSWHAAGTYRIADGRGGAGTGNQRFAPINSWPDNVNLDKARRLLWPIKKKYGNKLSWADLIAYAGTIAYESMGLKTFGFAFGREDIWHPEKDTYWGSEKEWLAPSGSEGSRYSGERDLENPLAAVMMGLIYVNPEGVDGNPDPLKTAHDIRVTFERMAMNDEETVALTAGGHTVGKCHGNGDADQLGAEPEGAEIEDQGFGWLNKTKRGIGRDTVSSGIEGAWTTNPTQWDNGYF 330          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG1_RALEJ (Catalase-peroxidase 1 OS=Ralstonia eutropha (strain JMP134) GN=katG1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 64/237 (27.00%), Postives = 92/237 (38.82%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDV-NTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----PE----------------------------------GRLPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCHKE------------------------------------RSGFEGPWTNNPLIFDNSY 685
            H  P+ +R++WH+AGTY + + + GG  G  R     +   N  LD A RLL P+K+++   +S+AD    AG VA E  G     F  GRPD  +P      PE                                  G  P+    +  +R+ F  M ++D++ V L  GGHT+G+ H                                       SG EG WTNNP  +DN +
Sbjct:   93 HYGPLFIRMSWHAAGTYRIADGRGGGGEGQQRFAPLNSWPDNANLDKARRLLWPLKKKYGQKVSWADLLIFAGNVAYESMGFKTFGFGFGRPDVWEPEDIFWGPEDTWLGDERYSGDRELAKPLANVQMGLIYVNPEGPGGNPDPLAAARDIRETFARMAMNDEETVALIVGGHTVGKTHGAAPAAGNVGLEPEGAPIEEQGLGWKNKFGSGKGSDAITSGLEGAWTNNPTKWDNGF 329          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_SALRD (Catalase-peroxidase OS=Salinibacter ruber (strain DSM 13855) GN=katG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 64/237 (27.00%), Postives = 88/237 (37.13%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNG-LDIAVRLLEPIKQQFPI-LSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP--------------------------------------PEG--RLPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTNNPLIFDNSY 685
            H  P+ +R++WH+AGTY      GG  G  +    L    +N  LD A RLL P+KQ++   +S+AD   LAG VA+E  G     F  GR D   P                                       PEG    P+    +  +R  FG M ++D++   L +GGHT G+ H                                      SG EGPWT+ P  +D  Y
Sbjct:   81 HYGPLFIRMSWHAAGTYRTTDGRGGSSGGRQRLAPLNSWPDNANLDKARRLLWPVKQKYGRKISWADLLVLAGNVAMESMGFETFGFAGGREDDFKPDESIDWGPEDEMETWGRFNEEDELDNPLGATVMGLIYVNPEGPESTPDPEWSAQRIRKSFGRMAMNDRETAALIAGGHTFGKVHGADTDEHLQAEPEAAPIEQQGLGWHNEHGSGKGGDTITSGIEGPWTDAPTEWDMGY 317          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_RHILO (Catalase-peroxidase OS=Rhizobium loti GN=katG PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 57/181 (31.49%), Postives = 78/181 (43.09%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------PEGRL----------------------------------PNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            H  P+ +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL PIKQ++   +S+AD   L G VA+E  G     F  GR D  +P       PEG+                                   P+    +  +RD F  M ++D++ V L +GGHT G+ H
Sbjct:   86 HYGPLFIRMAWHSAGTYRIADGRGGAGAGQQRFAPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLLILTGNVALESMGFKTFGFAGGRADVWEPEQDVYWGPEGKWLADERYSGDRDLQNPLGAVQMGLIYVNPEGPNGNPDPLAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH 266          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_NITWN (Catalase-peroxidase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=katG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 67/237 (28.27%), Postives = 95/237 (40.08%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNG-LDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----PEGR----------------------------------LPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH------------------------KER-----------SGFEGPWTNNPLIFDNSYF 688
            H   +++R+AWHSAGTY +    GG  G  +    L    +N  LD A RLL PIKQ++   +S+AD Y LAG  A+E  G   + F  GR D+ +P      PEG                                    P+    +  +R+ F  M ++D++ V L +GGHT G+ H                        K R           SG E  WT  P  +DN++F
Sbjct:   85 HYGGLMVRMAWHSAGTYRITDGRGGAGGGQQRFAPLNSWPDNVLLDRARRLLWPIKQKYGRKISWADLYVLAGNAALESMGFKPLGFAGGRVDEWEPQELFWGPEGAWLGDERYSGERELAEPLAAVQMGLIYVNPEGPNGQPDPLAAAKDIRETFLRMAMNDEETVALIAGGHTFGKTHGAGDASLVGPVPDSAPIEDQGLGWKGRFGTGKGADAIGSGLEVTWTQTPTKWDNNFF 321          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_GRAFK (Catalase-peroxidase OS=Gramella forsetii (strain KT0803) GN=katG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 65/239 (27.20%), Postives = 88/239 (36.82%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP--------------------------------------PEGR--LPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCHKE------------------------------------RSGFEGPWTNNPLIFDNSYF 688
            H  P  +R+AWHSAGTY +    GG   G  R     +   N  LD A  LL P+K+++   LS+AD   LAG  A E  G     F  GR D  +P                                       PEG    P+  + + ++R+ FG M ++D + V L +GGHT G+ H                                       SG EG WT+ P  + N YF
Sbjct:  102 HYGPFFIRMAWHSAGTYRIGDGRGGAGSGQQRFAPLNSWPDNANLDKARLLLWPVKKKYGKNLSWADLLVLAGNCAHESMGLKMFGFAGGREDVWEPAQDVYWGAETEWLNNDERYAGEELENPLGAAHMGLIYVNPEGHNGNPDPVEAASYIRETFGRMAMNDYETVALIAGGHTFGKTHGAADAEEYVEAEPAAAGIESQGLGWKNTFGTGNGADTITSGIEGAWTDTPTKWSNKYF 340          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_CLOBB (Catalase-peroxidase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=katG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 62/190 (32.63%), Postives = 85/190 (44.74%), Query Frame = 2
Query:  218 PIILRLAWHSAGTYDV-NTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP--------------------------------------PEGRLPNATK---GSDH-LRDVFGHMGLSDKDIVVL-SGGHTLGRCHKERS-GFEGP 649
            P+ +R+AWHSAGTY V + + GG  G  R     +   N  LD A RLL PIK+++   +S+AD   L G  A+E  G   + F  GR D  +P                                       PEG  PN      GS H +R+ F  M ++D++ V L +GGHT G+CH   S  + GP
Sbjct:   88 PLFIRMAWHSAGTYRVGDGRGGGSLGLQRFAPLNSWPDNINLDKARRLLWPIKKKYGNKISWADLLILTGNCALESMGLKTLGFGGGRVDVWEPQEDIYWGSEKEWLGDEREKGDKELENPLAAVQMGLIYVNPEG--PNGNPDPLGSAHDVRETFARMAMNDEETVALIAGGHTFGKCHGAASPSYVGP 275          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: APX4_ARATH (Probable L-ascorbate peroxidase 4, chloroplastic OS=Arabidopsis thaliana GN=APX4 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11
Identity = 53/166 (31.93%), Postives = 78/166 (46.99%), Query Frame = 2
Query:  200 AEKHCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQFPI------LSYADFYQLAGVVAVEVT---------GGPE------------------IPFHPGRPDKSDPPPEGRLPNATKGS-DHLRDVFGHMGLSDKDIVVLS 595
            A+    P +L+LA + A TYD  TK+GG  G+IR   EL+   N GL   + L+E +K++         +SYAD  QLAG  AV+ T         GG E                     + GR D ++  PEGR+P   K +   ++D F  +GL  + + V+S
Sbjct:  108 AKPELVPSLLKLALNDAMTYDKATKSGGANGSIRFSSELSRAENEGLSDGLSLIEEVKKEIDSISKGGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAYGSAGQWGLFDRNFGRSDATEADPEGRVPQWGKATVQEMKDKFIAVGLGPRQLAVMS 273          
The following BLAST results are available for this feature:
BLAST of CK938642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
KATG_CLOBA5.477e-1233.16Catalase-peroxidase OS=Clostridium botulinum (stra... [more]
KATG_BRASB5.477e-1230.39Catalase-peroxidase OS=Bradyrhizobium sp. (strain ... [more]
KATG_PSYIN7.154e-1228.40Catalase-peroxidase OS=Psychromonas ingrahamii (st... [more]
KATG1_RALEJ7.154e-1227.00Catalase-peroxidase 1 OS=Ralstonia eutropha (strai... [more]
KATG_SALRD1.220e-1127.00Catalase-peroxidase OS=Salinibacter ruber (strain ... [more]
KATG_RHILO1.220e-1131.49Catalase-peroxidase OS=Rhizobium loti GN=katG PE=3... [more]
KATG_NITWN1.594e-1128.27Catalase-peroxidase OS=Nitrobacter winogradskyi (s... [more]
KATG_GRAFK1.594e-1127.20Catalase-peroxidase OS=Gramella forsetii (strain K... [more]
KATG_CLOBB1.594e-1132.63Catalase-peroxidase OS=Clostridium botulinum (stra... [more]
APX4_ARATH1.594e-1131.93Probable L-ascorbate peroxidase 4, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_C01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938642 ID=CK938642; Name=CK938642; organism=Citrus sinensis; type=EST; length=790bp
GGGAGAAACACCCGCTNNNNNATCTTCAGCTCGTCACAGTTCAGTTCGGT
CATCGCATTCGACAGTAACTACTTAACAAGCCTCAAGCTGAGCTTCTTCT
TCTTCTTCTTTTTTCATCATGGGAAAGTGTTATCCAAAAGTGGGCGATGA
GTATCAGAAAGCAGTGGAGAAATGCAAGAGGAAACTCAGAGGACTCATTG
CTGAGAAACACTGTGCCCCTATCATTCTTCGCTTGGCATGGCACTCAGCG
GGGACTTATGACGTGAACACGAAGACAGGAGGGCCTTTTGGGACGATCAG
GCACCCAGATGAGCTTGCTCATGAGGCTAACAATGGTCTTGATATTGCTG
TCAGGCTCTTGGAGCCCATCAAGCAGCAGTTTCCTATCTTGTCCTACGCT
GATTTCTATCAGTTGGCTGGAGTTGTTGCCGTTGAAGTTACCGGAGGGCC
TGAAATACCTTTCCACCCTGGAAGACCGGACAAATCTGATCCGCCCCCAG
AAGGTCGCTTGCCAAATGCCACCAAAGGTTCTGACCATTTGAGAGATGTC
TTCGGCCACATGGGTCTGAGTGATAAGGATATTGTTGTTTTATCCGGCGG
TCATACATTGGGTAGGTGCCACAAGGAGCGTTCTGGATTTGAAGGACCCT
GGACTAACAATCCACTTATTTTTGACAATTCATATTTTAAGGAATTGCTG
AGTGGAGAGAAAGAAGGTCTACTTCAGCTGCCATCAGACAAGGCTCTTCT
CGAGGACCCAGTGTTTCGTCCTCTTGTTGAAAAATATGCT
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