CK938642

Overview
NameCK938642
Unique NameCK938642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_SINMW (Catalase-peroxidase OS=Sinorhizobium medicae (strain WSM419) GN=katG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 64/220 (29.09%), Postives = 93/220 (42.27%), Query Frame = 2
Query:  119 MGKCYPKVGDEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----PEGRL----------------------------------PNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            MGK +    +E++K  ++  KR L  L+ +          H   + +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL PIKQ++   +S+AD   L G VA+E  G     F  GR D  +P      PEG                                    P+    +  +R+ F  M ++D++ V L +GGHT G+ H
Sbjct:   48 MGKSF-NYAEEFRKLDLDALKRDLHALMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNRISWADLLILTGNVALESMGFKTFGFAGGRTDVWEPEELFWGPEGTWLGDERYSGERQLSEPLAAVQMGLIYVNPEGPNGNPDPVAAAHDIRETFARMAMNDEETVALIAGGHTFGKTH 266          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_ALTMD (Catalase-peroxidase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=katG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 55/177 (31.07%), Postives = 78/177 (44.07%), Query Frame = 2
Query:  218 PIILRLAWHSAGTY-DVNTKTGGPFGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-------------------------------------PEG--RLPNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            P  +RL+WHSAGTY  ++ + GG  G +R     +   N  LD A RLL PIKQ++   LS+ D   LAG V +E  G     F  GR D  +P                                      PEG   +P+    + ++R  F  M ++D++ V L +GGHT G+ H
Sbjct:  130 PFFIRLSWHSAGTYRTLDGRGGGDGGQMRFDPLNSWPDNGNLDKARRLLWPIKQKYGESLSWGDLMILAGTVGMENMGFDTYGFAGGRTDDWEPDMVYWGPEVEMLASDREEREGKLQRPLGATHMGLIYVNPEGPKGVPDPMGSAKNIRTAFARMAMNDEETVALIAGGHTFGKMH 306          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_PSEU5 (Catalase-peroxidase OS=Pseudomonas stutzeri (strain A1501) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 62/199 (31.16%), Postives = 83/199 (41.71%), Query Frame = 2
Query:  209 HCAPIILRLAWHSAGTYDVNTKTGGPFGTIRHPDEL-AHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----PEGRL----------------------------------PNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCHKERS-GFEGPWTNNPLIFD 676
            H   + +R+AWHSAGTY +    GG  G  +    L +   N  LD A RLL PIKQ++   LS+AD + L G VA+E  G     F  GR D  +P      PEG                                    P+    +  +R+ F  M ++D + V L +GGHT G+ H      F GP     LI D
Sbjct:   90 HYGGLFIRMAWHSAGTYRITDGRGGAGGGQQRFAPLNSWPDNASLDKARRLLWPIKQKYGRKLSWADLFVLTGNVALESMGFKTFGFGGGRADTWEPEELFWGPEGTWLGDERYSGERQLHPGLGAVQMGLIYVNPEGPNGNPDPKAAAVDIRETFARMAMNDYETVALIAGGHTFGKTHGAGDPSFIGPEPEGALIED 288          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_ACIBY (Catalase-peroxidase OS=Acinetobacter baumannii (strain AYE) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 57/177 (32.20%), Postives = 81/177 (45.76%), Query Frame = 2
Query:  221 IILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------------------------------------PEGRLPNAT----KGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            + +RLAWH+AGTY +    GG   G  R     +   N  LD A RLL P+KQ++   +S+AD + LAG +A+E +G     F  GR D  +P                                     PEG  P A+      +  +R  FG+M + D++IV L +GGHTLG+ H
Sbjct:   92 LFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEG--PQASGDPRSAAPFIRATFGNMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_ACIBT (Catalase-peroxidase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=katG PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 57/177 (32.20%), Postives = 81/177 (45.76%), Query Frame = 2
Query:  221 IILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------------------------------------PEGRLPNAT----KGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            + +RLAWH+AGTY +    GG   G  R     +   N  LD A RLL P+KQ++   +S+AD + LAG +A+E +G     F  GR D  +P                                     PEG  P A+      +  +R  FG+M + D++IV L +GGHTLG+ H
Sbjct:   92 LFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEG--PQASGDPRSAAPFIRATFGNMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_ACIBC (Catalase-peroxidase OS=Acinetobacter baumannii (strain ACICU) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 57/177 (32.20%), Postives = 81/177 (45.76%), Query Frame = 2
Query:  221 IILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------------------------------------PEGRLPNAT----KGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            + +RLAWH+AGTY +    GG   G  R     +   N  LD A RLL P+KQ++   +S+AD + LAG +A+E +G     F  GR D  +P                                     PEG  P A+      +  +R  FG+M + D++IV L +GGHTLG+ H
Sbjct:   92 LFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEG--PQASGDPRSAAPFIRATFGNMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_ACIB5 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB0057) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 57/177 (32.20%), Postives = 81/177 (45.76%), Query Frame = 2
Query:  221 IILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------------------------------------PEGRLPNAT----KGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            + +RLAWH+AGTY +    GG   G  R     +   N  LD A RLL P+KQ++   +S+AD + LAG +A+E +G     F  GR D  +P                                     PEG  P A+      +  +R  FG+M + D++IV L +GGHTLG+ H
Sbjct:   92 LFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEG--PQASGDPRSAAPFIRATFGNMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_ACIB3 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB307-0294) GN=katG PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 57/177 (32.20%), Postives = 81/177 (45.76%), Query Frame = 2
Query:  221 IILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP------------------------------------PEGRLPNAT----KGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            + +RLAWH+AGTY +    GG   G  R     +   N  LD A RLL P+KQ++   +S+AD + LAG +A+E +G     F  GR D  +P                                     PEG  P A+      +  +R  FG+M + D++IV L +GGHTLG+ H
Sbjct:   92 LFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEG--PQASGDPRSAAPFIRATFGNMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_RHIME (Catalase-peroxidase OS=Rhizobium meliloti GN=katG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11
Identity = 62/211 (29.38%), Postives = 90/211 (42.65%), Query Frame = 2
Query:  146 DEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----PEGRL----------------------------------PNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            +E++K  ++  KR LR L+ +          H   + +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL PIKQ++   +S+AD   L G VA+E  G     F  GR D  +P      PEG                                    P+    +  +R+ F  M ++D++ V L +GGHT G+ H
Sbjct:   54 EEFKKLDLDALKRDLRALMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRITDGRGGAGQGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGNRISWADLLILTGNVALESMGFKTFGFAGGRVDVWEPEELFWGPEGTWLGDERYSGERQLSEPLAAVQMGLIYVNPEGPNGNPDPVAAARDIRETFARMAMNDEETVALIAGGHTFGKTH 264          
BLAST of CK938642 vs. ExPASy Swiss-Prot
Match: KATG_RHOPT (Catalase-peroxidase OS=Rhodopseudomonas palustris (strain TIE-1) GN=katG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.056e-11
Identity = 61/211 (28.91%), Postives = 88/211 (41.71%), Query Frame = 2
Query:  146 DEYQKA-VEKCKRKLRGLIAEK---------HCAPIILRLAWHSAGTYDVNTKTGGP-FGTIRHPDELAHEANNGLDIAVRLLEPIKQQF-PILSYADFYQLAGVVAVEVTGGPEIPFHPGRPDKSDPP-----PEGRL----------------------------------PNATKGSDHLRDVFGHMGLSDKDIVVL-SGGHTLGRCH 622
            +E++K  +E  K+ L  L+ +          H   + +R+AWHSAGTY +    GG   G  R     +   N  LD A RLL PIKQ++   +S+AD   L G VA+E  G     F  GR D  +P      PEG                                    P+    +  +R+ F  M + D++ V L +GGHT G+ H
Sbjct:   55 EEFKKLDLEAVKKDLHALMTDSQEWWPADFGHYGGLFVRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNVALESMGFKTFGFAGGRADVWEPEELYWGPEGTWLGDERYSGERQLAEPLGAVQMGLIYVNPEGPNGNPDPVAAAKDIRETFARMAMDDEETVALIAGGHTFGKTH 265          
The following BLAST results are available for this feature:
BLAST of CK938642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
KATG_SINMW2.081e-1129.09Catalase-peroxidase OS=Sinorhizobium medicae (stra... [more]
KATG_ALTMD2.081e-1131.07Catalase-peroxidase OS=Alteromonas macleodii (stra... [more]
KATG_PSEU52.718e-1131.16Catalase-peroxidase OS=Pseudomonas stutzeri (strai... [more]
KATG_ACIBY2.718e-1132.20Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBT2.718e-1132.20Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBC2.718e-1132.20Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB52.718e-1132.20Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB32.718e-1132.20Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_RHIME3.550e-1129.38Catalase-peroxidase OS=Rhizobium meliloti GN=katG ... [more]
KATG_RHOPT6.056e-1128.91Catalase-peroxidase OS=Rhodopseudomonas palustris ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_C01 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938642 ID=CK938642; Name=CK938642; organism=Citrus sinensis; type=EST; length=790bp
GGGAGAAACACCCGCTNNNNNATCTTCAGCTCGTCACAGTTCAGTTCGGT
CATCGCATTCGACAGTAACTACTTAACAAGCCTCAAGCTGAGCTTCTTCT
TCTTCTTCTTTTTTCATCATGGGAAAGTGTTATCCAAAAGTGGGCGATGA
GTATCAGAAAGCAGTGGAGAAATGCAAGAGGAAACTCAGAGGACTCATTG
CTGAGAAACACTGTGCCCCTATCATTCTTCGCTTGGCATGGCACTCAGCG
GGGACTTATGACGTGAACACGAAGACAGGAGGGCCTTTTGGGACGATCAG
GCACCCAGATGAGCTTGCTCATGAGGCTAACAATGGTCTTGATATTGCTG
TCAGGCTCTTGGAGCCCATCAAGCAGCAGTTTCCTATCTTGTCCTACGCT
GATTTCTATCAGTTGGCTGGAGTTGTTGCCGTTGAAGTTACCGGAGGGCC
TGAAATACCTTTCCACCCTGGAAGACCGGACAAATCTGATCCGCCCCCAG
AAGGTCGCTTGCCAAATGCCACCAAAGGTTCTGACCATTTGAGAGATGTC
TTCGGCCACATGGGTCTGAGTGATAAGGATATTGTTGTTTTATCCGGCGG
TCATACATTGGGTAGGTGCCACAAGGAGCGTTCTGGATTTGAAGGACCCT
GGACTAACAATCCACTTATTTTTGACAATTCATATTTTAAGGAATTGCTG
AGTGGAGAGAAAGAAGGTCTACTTCAGCTGCCATCAGACAAGGCTCTTCT
CGAGGACCCAGTGTTTCGTCCTCTTGTTGAAAAATATGCT
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