CK938637

Overview
NameCK938637
Unique NameCK938637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP409_ARATH (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 45/136 (33.09%), Postives = 73/136 (53.68%), Query Frame = 2
Query:  164 FCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 571
            FC D +  +     ++M EEG  P++V Y+ L+ +YC+  R++EA  L K M     +P   T+ +++ GLC+ G V  A +      R + RG  P    Y+ LI A C++G  Q +  LL +M+G  ++PD  T
Sbjct:  246 FCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFH---RMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFT 378          

HSP 2 Score: 75.8702 bits (185), Expect = 3.736e-13
Identity = 41/135 (30.37%), Postives = 71/135 (52.59%), Query Frame = 2
Query:  182 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            +ED  + +  M   G  PN   ++ L + +C +   RE  + +++M   G+ P   T+NT++S  CR+G +  A  L +   R   R  +P    Y+ LIK LC+ G  + A     +MV +GI PD +++N+L+
Sbjct:  217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR---RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348          

HSP 3 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 57/201 (28.36%), Postives = 105/201 (52.24%), Query Frame = 2
Query:   14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV---GKGILPDYLTWNSLLICLSQ 601
            +EG +  +  Y++++    R     EA    K M   ++ P  V  +  I G C DG V +A + F +M++ G  P+ + Y+ LI+AYC+E  ++++ +L+ EM G+  +P   T   ++ G  R+G + +A+  V E  R   +  +P       LI +LC++G   +A  LL +++   G    P+  T+N+L+  LS+
Sbjct:  264 EEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR--LKVDIPFE-VCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSR 459          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP238_ARATH (Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 57/183 (31.15%), Postives = 89/183 (48.63%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            Y S++ GL      DEA +    ME+   +P  V  +  I GFC    VED  + F +M ++G V N + Y  LI  YC   R   A E+  +M+     P   T+N +L GLC  G V  AL ++ E MR   R        Y+ +I+ +C+ G  + A  L   +  KG+ P+ +T+ +++
Sbjct:  296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL-MIFEYMR--KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475          

HSP 2 Score: 77.0258 bits (188), Expect = 1.677e-13
Identity = 47/142 (33.10%), Postives = 69/142 (48.59%), Query Frame = 2
Query:  161 GFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            G+C    +EDA   FDQ++  G  PNVV Y  LI   C+   +  A EL  +M  +G  P   T+N +++GLC  G  G A  L+ + M+   R   P    ++ LI A  + G    A  L   M+   + PD  T+ SL+
Sbjct:  162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK---RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP158_ARATH (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 59/200 (29.50%), Postives = 97/200 (48.50%), Query Frame = 2
Query:    5 EGSKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL----PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            E  ++G K     +  ++ G  +    D+ LE L  ME   + P  V  +  +  FC +G  +D+++  ++M EEG VP++V ++  I A C+E +V +AS +  +M    YL    P + T+N +L G C+ G +  A  L E         SL     Y+  ++ L   G F  A  +L QM  KGI P   ++N L+
Sbjct:  172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS---YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368          

HSP 2 Score: 77.7962 bits (190), Expect = 9.832e-14
Identity = 55/204 (26.96%), Postives = 95/204 (46.57%), Query Frame = 2
Query:   35 ISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH---------------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 577
            I  Y+ ++ GL +     +A   +  M++  + P AV     + G+C  G V+ AK    +M+    +PN    + L+H+  +  R+ EA EL+++M   GY     T N ++ GLC  G +  A+++V+  MR  G  +L   G+                     YS L+  LC+ G F  A  L  +M+G+ + PD + +N
Sbjct:  361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK-GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563          

HSP 3 Score: 71.2478 bits (173), Expect = 9.202e-12
Identity = 48/157 (30.57%), Postives = 76/157 (48.41%), Query Frame = 2
Query:  128 PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL----PDYLTWNSLL 586
            P+    +L I   C    V+ A+  FD+M E+G  PN   +  L+  YC+     +  EL+  M   G LP    +NT++S  CR+G    + K+VE+ MR    G +P    ++  I ALC++G    AS +   M     L    P+ +T+N +L
Sbjct:  145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK-MR--EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298          

HSP 4 Score: 71.2478 bits (173), Expect = 9.202e-12
Identity = 44/153 (28.76%), Postives = 74/153 (48.37%), Query Frame = 2
Query:  128 PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            P ++  +L + GFC  G +EDAK  F+ + E   + ++  Y+  +    +  +  EA  ++K+MT  G  P   ++N ++ GLC+ G +  A  +V    R    G  P +  Y  L+   C  G   +A  LL +M+    LP+  T N LL
Sbjct:  289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR---NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP149_ARATH (Pentatricopeptide repeat-containing protein At2g06000 OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.213e-15
Identity = 52/157 (33.12%), Postives = 76/157 (48.41%), Query Frame = 2
Query:  125 FPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 595
            FP  V  +  I G+C  G V    R +++M   G  PN   Y  LI+A C E R+ +A EL+ ++     +P    +N V+ G C+ G V  A  +VEE  +   +   P    ++ LI   C KG    A  +  +MV  G  PD +T +SLL CL
Sbjct:  344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK---KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497          

HSP 2 Score: 76.6406 bits (187), Expect = 2.190e-13
Identity = 52/200 (26.00%), Postives = 99/200 (49.50%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQMEKL--FPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI--CLSQQTTWSVNMSH 631
            Y S++ G  +     EA   L  M +L  +P  V  ++ + G+   G++  A+    +MI  G  P+VV +  LI  YC+  +V +   L +EM   G  P A T++ +++ LC +  +  A +L+ +      +  +P    Y+P+I   C+ G    A++++ +M  K   PD +T+  L+I  C+  +   +V++ H
Sbjct:  280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQ---LASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476          

HSP 3 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 56/193 (29.02%), Postives = 90/193 (46.63%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQMEKLF--PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGV--PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG--IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 604
            ++ ++ GL      ++ALE L  M      P  V  +  I GFC   ++  A   F   ++ G V  P+VV Y  +I  YC+  ++REAS L+ +M   G  P   TFN ++ G  + G + TA     E++RG  I  G  P    ++ LI   C  G       L  +M  +G+ P+  T++ L+  L  +
Sbjct:  209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA-----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP340_ARATH (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15
Identity = 53/169 (31.36%), Postives = 88/169 (52.07%), Query Frame = 2
Query:   86 DEALEHLKQMEKLFPRA--VDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            DEA+  LK+M+ +   A  V  +  I GFC  G+++  K  FD+++E G  P  + Y+ LI  +C+  +++EASE+ + M   G  P   T+  ++ GLC  G    AL+L+      I +   P +  Y+ +I  LC+ G    A  ++  M  +   PD +T+N LL
Sbjct:  229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN---LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394          

HSP 2 Score: 80.8777 bits (198), Expect = 1.161e-14
Identity = 52/155 (33.55%), Postives = 81/155 (52.26%), Query Frame = 2
Query:  128 PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL--PDYLTWNSLL 586
            P A+  +  I GFC  G +++A   F+ MIE G  PNV  Y  LI   C   + +EA +L+  M      P A T+N +++ LC+ G V  A+++VE   +   R + P +  Y+ L+  LC KG    AS LL  M+       PD +++N+L+
Sbjct:  280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK---RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431          

HSP 3 Score: 72.0182 bits (175), Expect = 5.395e-12
Identity = 50/193 (25.91%), Postives = 91/193 (47.15%), Query Frame = 2
Query:   14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            K G    +  ++ +L GL R     +A+  L++M +  L P     +  I GFC   ++E A    ++M   G   ++V +  LI A+C+  ++ EA   +KEM   G       + +++ G C  G +     L +E +    RG  P +  Y+ LI+  C+ G  + AS +   M+ +G+ P+  T+  L+
Sbjct:  135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE---RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP131_ARATH (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15
Identity = 51/182 (28.02%), Postives = 94/182 (51.65%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 583
            Y  +L   Y+E   DEA++ L ++  +   P  V  ++ + GFC +G  +DA   F ++  +G   NVV Y+ L+   C + R  EA+ L+ EM G    P   T+N +++ L   G    AL++++E  +G  +  +  +  Y+P+I  LC++G        L +M+ +   P+  T+N++
Sbjct:  214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS-YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394          

HSP 2 Score: 73.1738 bits (178), Expect = 2.422e-12
Identity = 43/153 (28.10%), Postives = 79/153 (51.63%), Query Frame = 2
Query:  128 PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            P     +  +   C    ++ A R  + M+  G +P+   Y  L++  C+   V  A +L+++M  HGY     T+N ++ GLC  G++  +L+ VE  M+   +G  P +  YS L++A  ++ G   A  LL +++ KG  P+ +++N LL
Sbjct:  104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQ---KGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLL 253          

HSP 3 Score: 68.9366 bits (167), Expect = 4.567e-11
Identity = 50/195 (25.64%), Postives = 94/195 (48.21%), Query Frame = 2
Query:   38 SPYDSVLYGLYREXXQDEALEHLKQMEKL-FP-RAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 598
            S Y  ++  L +      A++ +++ME   +P   V  +  + G C+ G +  + +  ++++++G  PN   Y  L+ A  +E    EA +L+ E+   G  P   ++N +L+G C++G    A+ L  E         LP  G       Y+ L++ LC  G ++ A+ LL +M G    P  +T+N L+  L+
Sbjct:  142 SAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE---------LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.892e-15
Identity = 50/170 (29.41%), Postives = 88/170 (51.76%), Query Frame = 2
Query:   26 KGRISP----YDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 517
            K +ISP    +  ++    +E    EA + LK+M +  + P  +  +  I GFC +  +E+A +  D MI +G  P+++ ++ LI+ YC+  R+ +  EL +EM+  G +    T+NT++ G C+ G +  A KL +E    + R   P    Y  L+  LC+ G  + A
Sbjct:  326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE---MVSRRVRPDIVSYKILLDGLCDNGELEKA 492          

HSP 2 Score: 80.8777 bits (198), Expect = 1.161e-14
Identity = 51/183 (27.87%), Postives = 97/183 (53.01%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQMEKLFPR--AVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            Y  VL  + +      A+E L++ME+   +  AV  S+ I G C DG +++A   F++M  +G   +++ Y+ LI  +C   R  + ++L+++M      P   TF+ ++    ++G +  A +L++E M+   RG  P +  Y+ LI   C++   + A  ++  M+ KG  PD +T+N L+
Sbjct:  231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ---RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410          

HSP 3 Score: 80.8777 bits (198), Expect = 1.161e-14
Identity = 50/183 (27.32%), Postives = 93/183 (50.82%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQMEKLFPRA--VDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            Y  ++ GL ++   D A     +ME    +A  +  +  I GFC  G  +D  +    MI+    PNVV +  LI ++ +E ++REA +L+KEM   G  P   T+N+++ G C++  +  A+++V+     I +G  P    ++ LI   C+         L  +M  +G++ + +T+N+L+
Sbjct:  266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD---LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445          

HSP 4 Score: 79.7221 bits (195), Expect = 2.587e-14
Identity = 50/184 (27.17%), Postives = 94/184 (51.09%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQMEKLF--PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            ++++L GL  E    EALE + +M ++   P  +  +  + G C++G V DA    D+M+E G  PN V Y  +++  C+  +   A EL+++M        A  ++ ++ GLC+ G++  A  L  E +++G     +     Y+ LI   C  G +   + LL  M+ + I P+ +T++ L+
Sbjct:  161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT----YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340          

HSP 5 Score: 69.707 bits (169), Expect = 2.677e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  146 SLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            S+ I  FC    +  A     ++++ G  P+ VI++ L++  C E RV EA EL+  M   G+ P   T NT+++GLC  G V  A+ L++   R +  G  P    Y P++  +C+ G    A  LL +M  + I  D + ++ ++
Sbjct:  127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID---RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.161e-14
Identity = 51/196 (26.02%), Postives = 94/196 (47.96%), Query Frame = 2
Query:    5 EGSKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            E   +G +  +  Y S++  L       +A + L  M  +K+ P  V  +  I  F  +G   +A++ +D MI+    P++  Y+ L++ +C  +R+ +A ++ + M      P   T+NT++ G C+   V    +L  E      RG +  +  Y+ LI+ L   G   +A  +  QMV  G+ PD +T++ LL
Sbjct:  285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH---RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477          

HSP 2 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = 2
Query:   92 ALEHLKQMEKLF--PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWS 616
            AL  L +M KL   P  V  S  + G+C    + DA    DQM+E G  P+ + +  LIH      +  EA  L+  M   G  P   T+  V++GLC++G+   AL L+ +         +     ++ +I +LC+      A  L  +M  KGI P+ +T++SL+ CL     WS
Sbjct:  139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV---IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 312          

HSP 3 Score: 73.1738 bits (178), Expect = 2.422e-12
Identity = 45/168 (26.79%), Postives = 82/168 (48.81%), Query Frame = 2
Query:  110 QMEKLFPRAVDRSLK---------ILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            + EKL+   + RS+          + GFC+   ++ AK+ F+ M+ +   P+VV Y+ LI  +C+ +RV + +EL +EM+  G +    T+ T++ GL   G+   A K+ ++    +  G  P    YS L+  LC  G  + A  +   M    I  D   + +++
Sbjct:  348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ---MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512          

HSP 4 Score: 71.2478 bits (173), Expect = 9.202e-12
Identity = 55/201 (27.36%), Postives = 96/201 (47.76%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWSVNMSHF 634
            + ++++GL+      EA+  + +M +    P  V   + + G C  GD + A    ++M       +VVI++ +I + C+   V +A  L KEM   G  P   T+++++S LC  G    A +L+  DM  I +   P    ++ LI A  ++G F  A  L   M+ + I PD  T+NSL+   C+  +   +  M  F
Sbjct:  193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL-SDM--IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390          

HSP 5 Score: 69.3218 bits (168), Expect = 3.497e-11
Identity = 47/184 (25.54%), Postives = 86/184 (46.74%), Query Frame = 2
Query:   44 YDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV-EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            Y++++ G  +    ++  E  ++M    L    V  +  I G   DGD ++A++ F QM+ +G  P+++ Y  L+   C   ++ +A E+   M           + T++ G+C+ G V     L     ++G+     P    Y+ +I  LC K   Q A  LL +M   G LP+  T+N+L+
Sbjct:  403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK----PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.161e-14
Identity = 56/199 (28.14%), Postives = 95/199 (47.74%), Query Frame = 2
Query:   11 SKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 601
            SKEG       ++ ++ G  R    + A + L  M+K    P   + S  + GFC  G +++AK+ FD++ + G   + V Y  L++ +C+     EA +L+ EM          T+N +L GL  +G    AL+++++       G     G Y  ++ ALC  G  + A   L  M  +GI P + TWN L++ L +
Sbjct:  260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ---WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCE 455          
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.161e-14
Identity = 53/193 (27.46%), Postives = 93/193 (48.19%), Query Frame = 2
Query:   14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEKLFPR--AVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            + G    ++ Y+++L G +R      A E   +M+K       V  +  + GF V G+++ A+  FD+MI EG +P+V  Y+ +I   C+++ V  A  + +EM   GY P  +T+N ++ GL   G      +L++   R    G  P    Y+ +I+   E    + A  L  +M     LP+  T+N L+
Sbjct:  223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ---RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412          
The following BLAST results are available for this feature:
BLAST of CK938637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
PP409_ARATH3.992e-1533.09Pentatricopeptide repeat-containing protein At5g40... [more]
PP238_ARATH3.992e-1531.15Putative pentatricopeptide repeat-containing prote... [more]
PP158_ARATH3.992e-1529.50Pentatricopeptide repeat-containing protein At2g17... [more]
PP149_ARATH5.213e-1533.12Pentatricopeptide repeat-containing protein At2g06... [more]
PP340_ARATH6.809e-1531.36Pentatricopeptide repeat-containing protein At4g28... [more]
PP131_ARATH6.809e-1528.02Pentatricopeptide repeat-containing protein At1g79... [more]
PPR39_ARATH8.892e-1529.41Pentatricopeptide repeat-containing protein At1g12... [more]
PPR90_ARATH1.161e-1426.02Pentatricopeptide repeat-containing protein At1g62... [more]
PP392_ARATH1.161e-1428.14Pentatricopeptide repeat-containing protein At5g18... [more]
PP125_ARATH1.161e-1427.46Pentatricopeptide repeat-containing protein At1g74... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_B07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938637 ID=CK938637; Name=CK938637; organism=Citrus sinensis; type=EST; length=928bp
GGGGGAGGGTAGTAAGGAGGGTTCCAAGGGCCGTATTAGTCCATATGATA
GCGTGTTATATGGTCTCTACAGAGAAANNNAACAGGATGAAGCACTTGAG
CATCTAAAGCAAATGGAGAAGTTGTTCCCCAGAGCTGTTGATAGGAGCTT
GAAGATATTAGGCTTTTGTGTGGATGGCGACGTGGAAGATGCAAAAAGGT
GCTTTGATCAAATGATTGAGGAAGGGGGGGTTCCAAATGTTGTTATTTAT
GACTGCCTAATCCATGCATATTGCCAAGAAGAGCGAGTGCGCGAAGCATC
TGAGCTAATGAAGGAGATGACCGGCCATGGTTATTTACCTATTGCATCAA
CATTCAATACTGTTTTAAGTGGGTTATGCAGGCAAGGCAATGTTGGGACT
GCTTTGAAGCTCGTTGAGGAGGATATGCGTGGGATTGGGAGGGGTTCTTT
ACCTGGTAGTGGACATTACAGCCCTTTAATCAAGGCTCTTTGTGAGAAGG
GTGGTTTTCAGAGTGCGTCAATGCTCCTTGTGCAAATGGTTGGCAAGGGC
ATCCTTCCTGATTATCTGACGTGGAATTCGTTGCTTATTTGTCTTAGTCA
ACAAACAACATGGTCAGTCAACATGTCCCATTTCCCTAAATAAATAATTG
CGATTGATTATAAAGACCTGAACCGTTGCTGCCGAAGGCTTCTCTTGCTC
TTGCTGAATGAGATGGTGGTTCACGAGCTGTCGGCAAAAGAGAAAAGATG
CAAATTGCGCATTTGGCCCACGGAGCTGGTTCGGTTTGGTTAGGTTTGCG
CATACACGATACGACACATACATTCATAATCCATCGACGTGTGGAAGTTG
GCCACGTCTTTTGCTCTTTCAGTTCACTAAAAGACGACGTTGACACTTGA
CGCACAACACGCTCATTATTCACGTGGT
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