CK938622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938622 vs. ExPASy Swiss-Prot
Match: LHT1_ARATH (Lysine histidine transporter 1 OS=Arabidopsis thaliana GN=LHT1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.090e-24 Identity = 84/280 (30.00%), Postives = 132/280 (47.14%), Query Frame = 2 Query: 14 ITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGR-SVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSN----NPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSP--PENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLVDFANACIAVHLIGAYQVFCQPIFGFVE 832 IT YT + + + + V GKR Y ++ + + G + + + Q IGV I Y +T S+ + H + C ++IFA + VLS +PNF+ +S +S+ AAVMS +YS+I S +K + + + + V+ F +GDVAFAYA V++EIQ T+ S+P P M R V L Y ++GY FGN N L +P WL+ AN + +H+IG+YQ++ P+F +E Sbjct: 79 ITLYTLWQMVEMH---EMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQLIVEIGVCIVYMVTGGKSL----------KKFHELVCDDCKPIKLTYFIMIFASVHFVLSHLPNFNSISGVSLAAAVMSLSYSTIAWASSASKGVQEDVQYGYKAK-------TTAGTVFNFFSGLGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWRGVIVAYIVVALCYFPVALVGYYIFGNGVEDNIL--MSLKKPAWLIATANIFVVIHVIGSYQIYAMPVFDMME 336
BLAST of CK938622 vs. ExPASy Swiss-Prot
Match: LHTL1_ARATH (Lysine histidine transporter-like 1 OS=Arabidopsis thaliana GN=At1g48640 PE=3 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.017e-23 Identity = 84/286 (29.37%), Postives = 133/286 (46.50%), Query Frame = 2 Query: 14 ITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGR-SVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSN----NPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSP--PENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLVDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKR 850 IT YT + + + + V GKR Y ++ + + G R + + Q +GV I Y +T S+ + H + C + + ++IFA VLS +PNF+ +S +S++AAVMS +YS+I + AK + + + + V F +G +AFAYA V++EIQ T+ S+P P M R V L Y ++GY FGN N L P W + AN + +H+IG+YQ+F P+F VE + K+ Sbjct: 86 ITLYTLWQMVEMH---EMVPGKRFDRYHELGQFAFGERLGLYIIVPQQIIVEVGVCIVYMVTGGQSL----------KKFHEIACQDCSPIRLSFFIMIFASSHFVLSHLPNFNSISGVSLVAAVMSLSYSTIAWTATAAKGVQE-------DVQYGYKSGTTASTVLSFFTGLGGIAFAYAGHNVVLEIQATIPSTPSNPSKGPMWRGVVVAYVVVALCYFPVALVGYGVFGNAVLDNVL--MSLETPVWAIATANLFVVMHVIGSYQIFAMPVFDMVETFLVKK 349
BLAST of CK938622 vs. ExPASy Swiss-Prot
Match: LHTL5_ARATH (Lysine histidine transporter-like 5 OS=Arabidopsis thaliana GN=At1g71680 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 5.147e-23 Identity = 66/186 (35.48%), Postives = 97/186 (52.15%), Query Frame = 2 Query: 296 FACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSP--PENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLVDFANACIAVHLIGAYQVFCQPIFGFVEKWCNK 847 FA +Q+VLSQ P+F+ + +S+LAA+MSF YS I SIAK P + + V+ AF IG +AFA+A +V++EIQ T+ S+P P K M + V + Y+ + GY AFG + L P WL+ AN + +H+IG+YQVF +F +E + K Sbjct: 166 FAALQLVLSQSPDFNSIKIVSLLAALMSFLYSMIASVASIAKGTEHRPSTYGVRGD------TVASMVFDAFNGIGTIAFAFAGHSVVLEIQATIPSTPEVPSKKPMWKGVVVAYIIVIICYLFVAISGYWAFGAHVEDDVL--ISLERPAWLIAAANFMVFIHVIGSYQVFAMIVFDTIESYLVK 343
BLAST of CK938622 vs. ExPASy Swiss-Prot
Match: LHTL6_ARATH (Lysine histidine transporter-like 6 OS=Arabidopsis thaliana GN=At1g25530 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22 Identity = 87/300 (29.00%), Postives = 130/300 (43.33%), Query Frame = 2 Query: 2 GFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGRSVQLCGLAQYGNL-IGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNNPLMII-FACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSP--PENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLVDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGI 889 G + T + L +C V G R Y+D+ R + G + L Q + +G I Y +T + C C I+ F + +LSQ+PNF+ ++ +S+ AAVMS YS+I G SIA H + + +R F A+G ++FA+A V +EIQ T+ S+P P M + + Y ++ Y AFG D N L P WL+ AN + VH+IG+YQVF P+F +E R NKF +HG+ Sbjct: 72 GLTLNTMWQMVQLHEC------VPGTRFDRYIDLGRYAFGPKLGPWIVLPQQLIVQVGCNIVYMVTGGKCLKQFVEITCS-------TCTPVRQSYWILGFGGVHFILSQLPNFNSVAGVSLAAAVMSLCYSTIAWGGSIA-------HGRVPDVSYDYKATNPGDFTFRVFNALGQISFAFAGHAVALEIQATMPSTPERPSKVPMWQGVIGAYVVNAVCYFPVALICYWAFGQDVDDNVL--MNLQRPAWLIAAANLMVVVHVIGSYQVFAMPVFDLLE-----RMMVNKF-GFKHGV 343
BLAST of CK938622 vs. ExPASy Swiss-Prot
Match: LHTL3_ARATH (Lysine histidine transporter-like 3 OS=Arabidopsis thaliana GN=At1g61270 PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.187e-19 Identity = 60/191 (31.41%), Postives = 97/191 (50.79%), Query Frame = 2 Query: 287 MIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSP--PENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLVDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRW 853 ++IFA Q VLS + NF+ +S +S++AAVMS +YS+I S+ K + + ++ A+G++AFAYA V++EIQ T+ S+P P + M + V Y ++G+ FGN+ N L P L+ AN + +HL+G+YQV+ P+F +E K+W Sbjct: 164 ILIFASSQFVLSLLKNFNSISGVSLVAAVMSMSYSTIAWVASLTKGVANNVEYGYKRRNNTSVPLA-------FLGALGEMAFAYAGHNVVLEIQATIPSTPENPSKRPMWKGAIVAYIIVAFCYFPVALVGFWTFGNNVEENILK--TLRGPKGLIIVANIFVIIHLMGSYQVYAMPVFDMIESVMIKKW 345
BLAST of CK938622 vs. ExPASy Swiss-Prot
Match: LHTL4_ARATH (Lysine histidine transporter-like 4 OS=Arabidopsis thaliana GN=At3g01760 PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 7.691e-19 Identity = 63/192 (32.81%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 287 MIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAF-QAIGDVAFAYAFSTVLVEIQDTLKSSP--PENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLVDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRW 853 ++IFA Q VLS + NF+ +S +S++AAVMS +YS+I S+ K G + V AF A+G++AFAYA V++EIQ T+ S+P P + M + V Y ++G+ FGN + L +P LV AN + +HL+G+YQV+ P+F +E + W Sbjct: 163 ILIFASSQFVLSLLKNFNSISGVSLVAAVMSVSYSTIAWVASLRKGATTGSVEYGYR--------KRTTSVPLAFLSALGEMAFAYAGHNVVLEIQATIPSTPENPSKRPMWKGAVVAYIIVAFCYFPVALVGFKTFGNSVEESILE--SLTKPTALVIVANMFVVIHLLGSYQVYAMPVFDMIESVMIRIW 344 The following BLAST results are available for this feature:
BLAST of CK938622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938622 ID=CK938622; Name=CK938622; organism=Citrus sinensis; type=EST; length=924bpback to top |