CK938620

Overview
NameCK938620
Unique NameCK938620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938620 vs. ExPASy Swiss-Prot
Match: CIPKD_ARATH (CBL-interacting serine/threonine-protein kinase 13 OS=Arabidopsis thaliana GN=CIPK13 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.839e-16
Identity = 50/129 (38.76%), Postives = 81/129 (62.79%), Query Frame = 2
Query:   26 PLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKF-YKNLSTGLKDVVWKSGDE 409
            P ++NAF+++S S   +LS LFE+      +  RF S  P+ +IISK+EE A  + F V+K ++ ++L+G + G KG L++  EIFE+ PSL +VE++K GG+  E+ +F  K L   L+ ++    DE
Sbjct:  368 PASLNAFDILSFS---DLSGLFEEG----GQGARFVSAAPMTKIISKLEEIAKEVKFMVRKKDWSVRLEGCREGAKGPLTIRVEIFELTPSLVVVEVKKKGGNIEEYEEFCNKELRPQLEKLMHYQADE 489          
BLAST of CK938620 vs. ExPASy Swiss-Prot
Match: CIPKH_ARATH (CBL-interacting serine/threonine-protein kinase 17 OS=Arabidopsis thaliana GN=CIPK17 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.014e-16
Identity = 49/122 (40.16%), Postives = 76/122 (62.30%), Query Frame = 2
Query:    8 EEGPVAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGH--LSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNL 367
            E+ P +P  +NAF+LI  S  L+LS  FE +  L +R+ RFTS     +++  IE   + +GF ++K + KLK   E++ +K    LSV  E+FE++PSL +VELRKS GD+  + + Y+ L
Sbjct:  297 EKSPDSPTIINAFQLIGMSSFLDLSGFFETEK-LSERQIRFTSNSLAKDLLENIETIFTEMGFCLQKKHAKLKAIKEESTQKRQCGLSVTAEVFEISPSLNVVELRKSHGDSSLYKQLYERL 417          
BLAST of CK938620 vs. ExPASy Swiss-Prot
Match: CIPKF_ARATH (CBL-interacting serine/threonine-protein kinase 15 OS=Arabidopsis thaliana GN=CIPK15 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.548e-16
Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 2
Query:   29 LTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKK--NNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK 361
            + +NAFE+IS S G +LS LFEK  G  K E RFTS R  +EI  K+ E    L   V+K  + +++K+  E T       V  E+FE+APS +MV L+KSGGDT E+ +  K
Sbjct:  302 INLNAFEIISLSTGFDLSGLFEK--GEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEHEWRVKMSAEAT------VVEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMK 406          
BLAST of CK938620 vs. ExPASy Swiss-Prot
Match: CIPKP_ORYSJ (CBL-interacting protein kinase 25 OS=Oryza sativa subsp. japonica GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.905e-15
Identity = 42/123 (34.15%), Postives = 76/123 (61.79%), Query Frame = 2
Query:   26 PLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKN-LSTGLKDVV 391
            P ++NAF++I++S   +LS LFE++        RF S  PV +II+K++E A  + F  +  + ++ ++  + G+KG L+++ ++FE+   L MV++ K  GDT E+ +F  N L  GL+ +V
Sbjct:  373 PKSLNAFDIIASSPSFDLSGLFEER----GERMRFVSGAPVADIIAKLQEIAGMVSFTARTKDCQVSIEATRNGQKGALAISAKVFELTRELVMVQVCKKAGDTAEYRRFCDNELKAGLRGLV 491          
BLAST of CK938620 vs. ExPASy Swiss-Prot
Match: CIPKH_ORYSJ (CBL-interacting protein kinase 17 OS=Oryza sativa subsp. japonica GN=CIPK17 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.235e-14
Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 2
Query:   35 MNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLS--VATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGL 379
            +NAF+LI  +  L+LS  FE +  + +R  RFTS  P  +   KIE +A+ LGF V++ + KLKL     G K   S  V+ E+FE+ PS+ +VELRKS GD   + +  + +S+ +
Sbjct:  309 INAFQLIGMASSLDLSGFFEDEE-VSQRRIRFTSTHPPKDAFDKIESSATELGFQVQRGHSKLKLMRNCKGSKNPESFMVSAEVFELGPSVNVVELRKSNGDPALYRQLCERISSDM 424          
BLAST of CK938620 vs. ExPASy Swiss-Prot
Match: CIPK1_ORYSJ (CBL-interacting protein kinase 1 OS=Oryza sativa subsp. japonica GN=CIPK1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.235e-14
Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 2
Query:   26 PLTMNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKG-----HLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGL 379
            P  +NAF+LI  +  L+LS  FE++    +R+ RFTS     ++  KIE   + +GF V++ N KLK+     G K         V TE+ E+ PSLY+VEL+KS GD + + +  + LS  L
Sbjct:  310 PTHINAFQLIGMASALDLSGFFEEE-DASQRKIRFTSTHSPKDLFDKIENVVTEMGFQVQRGNSKLKVMKNGRGSKNLRNPSSFLVCTEVVELGPSLYVVELKKSHGDPILYRQLCERLSDEL 431          
BLAST of CK938620 vs. ExPASy Swiss-Prot
Match: CIPKD_ORYSJ (Putative CBL-interacting protein kinase 13 OS=Oryza sativa subsp. japonica GN=CIPK13 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.005e-14
Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 2
Query:   32 TMNAFELISTSQGLNLSSLFEKQMG----------LVKRETRFTSKRPVNEIISKIEEAASPLGFDVK-KNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYK-NLSTGLKDVV 391
            ++NAF++IS S G +LS LF++  G            K   RF S  PV  I++ +E AA+  G  V+ + +  + ++G + G  G L+VA EI+E+ P L +VE+R+  G   E+ +F++  L   L+++V
Sbjct:  363 SLNAFDIISFSPGFDLSGLFDQDDGGGAGAGSIPEQQKHTARFVSAAPVEVIVATLEAAAAAAGMAVREREDGSISMEGTREGEHGALAVAAEIYELTPELVVVEVRRKAGGAAEYEEFFRARLKPSLRELV 494          
BLAST of CK938620 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 8.850e-13
Identity = 46/120 (38.33%), Postives = 69/120 (57.50%), Query Frame = 2
Query:   35 MNAFELISTSQGLNLSSLFEKQMGLVKRETRFTSKRPVNEIISKIEEAASPLGFDVKKNNFKLKLQG---EKTGRKGH--LSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGL 379
            +NAF+LI  S  L+LS  FEK+  + +R+ RF S      +  KIE   +  GF V+KN+ KLK+     E    +GH  L ++ E+FE+  SLY+VEL++S GD   + +   +LS  L
Sbjct:  382 INAFQLIGMSSCLDLSGFFEKE-DVSERKIRFVSNYSPTSLFEKIESTVTEKGFQVQKNSGKLKVIQVCKEPANPRGHGNLLISAEVFEINESLYVVELKRSSGDCSLYRQLCASLSEDL 500          
The following BLAST results are available for this feature:
BLAST of CK938620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CIPKD_ARATH3.839e-1638.76CBL-interacting serine/threonine-protein kinase 13... [more]
CIPKH_ARATH5.014e-1640.16CBL-interacting serine/threonine-protein kinase 17... [more]
CIPKF_ARATH6.548e-1644.25CBL-interacting serine/threonine-protein kinase 15... [more]
CIPKP_ORYSJ1.905e-1534.15CBL-interacting protein kinase 25 OS=Oryza sativa ... [more]
CIPKH_ORYSJ1.235e-1439.32CBL-interacting protein kinase 17 OS=Oryza sativa ... [more]
CIPK1_ORYSJ1.235e-1437.40CBL-interacting protein kinase 1 OS=Oryza sativa s... [more]
CIPKD_ORYSJ8.005e-1433.33Putative CBL-interacting protein kinase 13 OS=Oryz... [more]
CIPKL_ORYSJ8.850e-1338.33CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_D06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938620 ID=CK938620; Name=CK938620; organism=Citrus sinensis; type=EST; length=811bp
GGGGGGAGAAGAAGGCCCTGTTGCACCTCTCACTATGAATGCGTTTGAGT
TGATCTCCACATCTCAGGGACTCAACCTCAGTTCCCTTTTCGAAAAGCAA
ATGGGACTTGTGAAACGAGAAACAAGATTTACATCCAAACGTCCTGTTAA
CGAAATTATATCGAAAATTGAGGAAGCTGCATCGCCTTTGGGTTTTGATG
TGAAGAAAAATAATTTCAAGTTGAAGCTTCAAGGGGAAAAAACTGGACGC
AAGGGTCATTTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCCTTCACT
TTACATGGTTGAGCTTCGAAAATCTGGAGGAGATACCTTAGAATTTCACA
AGTTTTACAAAAACCTTTCGACTGGGCTGAAAGATGTTGTTTGGAAATCA
GGAGATGAAACAATTGTTGAAGGATCTGCAGTCGCTGGTGGCGCAGGGTC
TCAATAGCGGATTTCCTTTCATGACTTGCACTGCTGAATATCTCCAGCAA
ATTATATATTGCTTTTGCACCATTGTATCTCAGCTTTGTATTTTATCCTC
TAGGCCATGTGTTTCCTTCATTTGTGATTCAGAACTCACTTCTCGTGTAC
CTTGGTTTGGCTTTTGTGTGGTTTCAGACTTCCAGATGTATCATCTCAAC
GGATATTGAACATAGTCAATTACCTGCAAATTATCAAAAAGAGTCTCAGT
CCACTGTCGTTTTCATTTTGTTTGTTTTTAGTGACTTGTCTATGGACCAG
AAAATTCAATAAAAAGAATATATTGTAAAAGAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
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