FC921794

Overview
NameFC921794
Unique NameFC921794
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length248
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.335e-11
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 1
Query:   13 RELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAAG 246
            R   LPPGP  WP++G L L+G +P+ ++  +++KYGP+M LK            E A+AFLKT D  FS RP P AG
Sbjct:   33 RRHRLPPGPIGWPVLGALPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRP-PNAG 109          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.335e-11
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query:   22 NLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAAG 246
            +LPPGP+ WP++G L L+G +P+ S+  +++KYG IM LK            + A+AFLKT D  FS RP P AG
Sbjct:   32 HLPPGPRGWPVIGALPLLGAMPHVSLAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRP-PNAG 105          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.335e-11
Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query:   10 RRELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPK 234
            ++ + L P P+  PI+GNL+ +G LP+RS+H LS+KYGP+M L             + A   +KTHD +++ RPK
Sbjct:   32 KQNMLLLPSPRKLPIIGNLHQLGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPK 106          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.356e-11
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 1
Query:   25 LPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRP 231
            LPP P P PI+G+L+L+ P P++  H LS +YGPI+ L             E A+ FLKTH+  FS RP
Sbjct:   31 LPPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRP 99          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.356e-11
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 1
Query:   22 NLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPK 234
            NLPP P  +P++GNL+ IG LP+RS+  L+E+YGP+M L             E AE  L+THD     RPK
Sbjct:   29 NLPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPK 99          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.430e-11
Identity = 33/75 (44.00%), Postives = 38/75 (50.67%), Query Frame = 1
Query:    4 GGRRELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYR 228
            GG    NLPPGPKPWPIVGNL  +G  P+     L++ YG I  LK              A   LKTHD + S R
Sbjct:   21 GGSGHKNLPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSAR 95          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.430e-11
Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 1
Query:   13 RELNLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAA 243
            +++NLPP P   P++GNL+ +   P+RS+H+LS +YGP+M L             E A   LKTHD  F+ RPK  A
Sbjct:   29 KKVNLPPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKA 105          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.430e-11
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 1
Query:   22 NLPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAA 243
            NLPP P   PI+GNL+ +G LP+RS+ +L+ + GP++ L             E+AE  LKTHD +F+ RP   A
Sbjct:   30 NLPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTA 103          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.705e-11
Identity = 30/69 (43.48%), Postives = 41/69 (59.42%), Query Frame = 1
Query:   25 LPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRP 231
            LPPGP   PI+GNL+L+GPLP++++  L+ +YGP+MQL+            E A   LK HD     RP
Sbjct:   55 LPPGPAQLPILGNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRP 123          
BLAST of FC921794 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.705e-11
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 1
Query:   25 LPPGPKPWPIVGNLNLIGPLPYRSIHALSEKYGPIMQLKXXXXXXXXXXXXEMAEAFLKTHDALFSYRPKPAA 243
            LPPGP   PI+GNL+ +G L Y+S H +S++YGP++ L+            E AE  LKTHD     RPK AA
Sbjct:   28 LPPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAA 100          
The following BLAST results are available for this feature:
BLAST of FC921794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
C75A5_EUSGR3.335e-1144.87Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A1_PETHY3.335e-1145.33Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71A2_SOLME3.335e-1140.00Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C93A3_SOYBN4.356e-1144.93Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71BK_ARATH4.356e-1145.07Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C80B1_ESCCA7.430e-1144.00(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71AI_ARATH7.430e-1141.56Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE7.430e-1141.89Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71E1_SORBI9.705e-1143.484-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BZ_ARATH9.705e-1145.21Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC06052D10T7 RindPdigS Citrus sinensis cDNA clone C06052D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921794 ID=FC921794; Name=FC921794; organism=Citrus sinensis; type=EST; length=248bp
CGCGGGGGCCGCCGGGAACTCAACTTACCGCCTGGCCCAAAGCCATGGCC
GATCGTCGGAAACCTCAACCTCATAGGCCCACTTCCCTATCGGTCCATCC
ATGCTCTGTCCGAAAAATATGGGCCTATCATGCAACTCAAATTCGGATCA
TTCCCCGTTGTTGTGGGATCTTCCGTTGAGATGGCGGAGGCTTTCCTTAA
AACCCACGACGCTCTGTTTTCTTACCGGCCCAAACCGGCCGCAGGTAA
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