CK938605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.426e-37 Identity = 81/277 (29.24%), Postives = 153/277 (55.23%), Query Frame = 1 Query: 13 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS---RGSQQYRALTVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 +++++ +EAE D L+GF V H + ++ +++P +++ T+SVFP+ + D VV+PYN+ L++ +LV +AD +VLDN AL I L + TPSF N L+S ++ T LR+PG +N+DL + +LIP PR HF M + P TS ++ R TV ++ +++ KN M P + Y++ + +G++ +V + ++ ++ + + F+ W P +++ ++ P ++ + N TS+ +F+R+ +QF Sbjct: 118 IMEMIDREAEGSDSLEGFMVMHSIAGGTGSGLGSFLLERLNDKFPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPGYMNNDLVGIIASLIPTPRCHFLMTSYTPFTSDQIDKAKTIRRTTVLDVMRRLLQPKNRMVLTTPSKTACYISILNIIQGEVDPTDVHQSLLRIRERQLANFIPWGPASIQVALTKRSPYVTTNHRVSGLMLANHTSVASLFKRMLDQF 394
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.426e-37 Identity = 80/276 (28.99%), Postives = 150/276 (54.35%), Query Frame = 1 Query: 7 DAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 D +L+++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ P+F +N ++S M+ T LR+PG +N+D+ L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M + G Y++ + +G + +V + + ++ + + F+ W P +++ ++ P G ++ + N T I+ +F+ + +Q+ Sbjct: 116 DEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFTSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSKKSPYIDSGHKVSGLMLANHTGIRSIFKVLYDQY 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.426e-37 Identity = 80/277 (28.88%), Postives = 152/277 (54.87%), Query Frame = 1 Query: 7 DAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT--SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 + +++++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP+ +D VV+PYN LS+ +L+ NAD +VLDN AL I LKL P+F +N ++S M+ T LR+PG +N+DL L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M + G Y++ + +G + +V + + ++ + + F+ W P +++ ++ P G ++ + N T I+ +F+ + +Q+ Sbjct: 116 EEIIEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPNE--NDVVVQPYNCLLSMKRLILNADCVVVLDNTALTSIAVDRLKLLQPTFPQINSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLIDQKVTSVRKTTVLDVMRRLLQTKNIMATGAIKKGAYMSILNIIQGDVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSKKSPYMESGHKVSGLMLANHTGIRSIFKVIYDQY 390
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37 Identity = 82/278 (29.50%), Postives = 151/278 (54.32%), Query Frame = 1 Query: 7 DAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY---RALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 D +L+++ +EA+ D L+GF + H + +I + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ P+F +N ++S M+ T LR+PG +N+D+ L +L+P PR HF M G+ PL+ Q+Y R T ++ +++ KN+M + G Y++ + +G + +V + + ++ + + F+ W P +++ ++ P G ++ + N T I+ +F+ + +Q+ Sbjct: 116 DEILEMIDREADGSDSLEGFVLTHSIAGGTGSGFGSYLLERINDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSL--DQKYTSVRKTTFLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSLQRIKERKLANFIPWGPASIQVALAKKSPYIDSGHKVSGLMLANHTGIRSIFKVLYDQY 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37 Identity = 85/286 (29.72%), Postives = 153/286 (53.50%), Query Frame = 1 Query: 7 DAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRG-----SQQYRALTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 + +LD++ +EAE CD L+GF +CH + I + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L +AD +VLDN AL I L L P +N LI+ M+ T LR+PG +N+DL L +LIP PR HF M G+ PLT+ + R TV ++ +++ KN+M + D + +Y++ + +G++ +V + + ++ + + F+EW P +++ ++ P ++ + N TS++ +F +V + Sbjct: 116 ETLLDMIDREAEYCDSLEGFNMCHSIAGGTGSGMGSYMLELISDRYSKKLIQTYSVFPNQSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERLHLHKPDVQQINSLIATVMAASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTAENAAGQVTSNIRKTTVLDVMRRLLQPKNIMVSTHTKSRDIANAKYISILNIIQGEVDPSQVHKSLQRIRERKQANFIEWGPASIQVALSKKSPYVQTAHRVSGLMLANHTSVRHLFNKVLRDY 401
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG_PHYPA (Tubulin gamma chain OS=Physcomitrella patens GN=TUBG1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.432e-37 Identity = 85/280 (30.36%), Postives = 153/280 (54.64%), Query Frame = 1 Query: 13 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L + P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ AKN+M ++ R +Y++ + +G++ +V + + ++ + + F+EW P +++ ++ P ++ + + TSI+ +F + Q+ Sbjct: 118 IMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLHIPNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQANAIRKTTVLDVMRRLLQAKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCISQY 397
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG_DICDI (Tubulin gamma chain OS=Dictyostelium discoideum GN=tubC PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.418e-37 Identity = 75/276 (27.17%), Postives = 152/276 (55.07%), Query Frame = 1 Query: 7 DAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 D + D++ +EA+ + L+GF + H + ++ + +P +++ T+SVFP S VV+ YN+ L++ +L+ENAD +VLDN AL+ I L++ P+ N L+S MS T LR+PG +N+DL + +LIP P+ HF + G+ PL+ R ++ R +V ++ +++ +N+M +A + G+Y++ + +G + ++ + ++ K + F++W P +++ ++ P ++ + N TS+ +F + +Q+ Sbjct: 116 DDIFDMIDREADGSESLEGFLLTHSISGGTGSGMGSYILERLNDRFPKKIIQTYSVFPDD--SSVVVQQYNSVLTLKRLIENADSTVVLDNNALHRIVGENLRIDQPTMDQTNSLVSTVMSASTTTLRYPGYMNNDLVGMLASLIPTPKCHFLITGYTPLSIDRQTESVRKTSVLDVMRRLLQPQNIMVSAPTKTGKYISILNIIQGDVDPTQIHNSLQRIREKRMATFIDWGPASIQIALSKKSPYIKSSHKVSGLMLANHTSVNHLFSHIIQQY 389
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.077e-37 Identity = 81/278 (29.14%), Postives = 153/278 (55.04%), Query Frame = 1 Query: 13 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFP-SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL---TVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 ++D++ +EA+ D L+GF + H + ++ + YP +++ T+SVFP S VSD VV+PYN+ L++ +L NAD +VLDN AL I L P+F N L+S MS T LR+PG +N+DL + +LIP PR HF + + P T++ ++ +A+ TV ++ +++ KN M + +P + +++ + +G+ +V + ++ ++ + + F+ W P +++ ++ P ++ + N TSI +F+R +Q+ Sbjct: 118 IMDMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIASLFKRTLDQY 395
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.077e-37 Identity = 81/278 (29.14%), Postives = 152/278 (54.68%), Query Frame = 1 Query: 13 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRAL---TVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 ++D++ +EAE D L+GF + H + ++ + +P +++ T+SVFP+ + VSD VV+PYN+ L++ +L NAD +VLDN AL I L + P+F N L+S MS T LR+PG +N+DL + +LIP PR HF + P TS+ + R + TV ++ +++ KN M + +P + +++ + +G+ +V + ++ ++ + + F+ W P +++ ++ P ++ + N TSI +F+R +Q+ Sbjct: 118 IVDMIDREAEGSDSLEGFSLLHSIAGGTGSGLGSYLLERLNDRFPKKIVQTYSVFPNNRSVSDVVVQPYNSLLTLKRLTLNADAVVVLDNAALAHIAADRLHIQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPTPRCHFLSTSYTPFTSQQVEDARTIRKTTVLDVMRRLLQPKNRMVSVNPGKQSCFISILNIIQGEADPNDVHKSLLRIRERKLATFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANHTSIASLFKRTLDQY 395
BLAST of CK938605 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 2.059e-36 Identity = 79/279 (28.32%), Postives = 148/279 (53.05%), Query Frame = 1 Query: 7 DAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ---YRALTVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSAKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQF 822 + V D++ +EA+ D L+GF H + ++ + +P +++ T+SVFP + +D VV PYN+ L++ +L +NAD +VLDN AL I L + PSF N L+S MS T LR+PG +++DL + +LIP PR HF + + P T Q R TV ++ +++ KN M + +P + Y++ + +G+ +V + ++ ++ + + F+ W P +++ ++ P ++ + N TS+ +F+R+ +Q+ Sbjct: 116 EEVFDMIDREADGSDSLEGFMFLHSIAGGTGSGLGSFLLERMNDRFPKKLIQTYSVFPDTQAADVVVNPYNSLLAMRRLTQNADSVVVLDNAALSRIVADRLHVQEPSFQQTNRLVSTVMSASTTTLRYPGYMHNDLVGIIASLIPTPRSHFLLTSYTPFTGDNIDQAKTVRKTTVLDVMRRLLQPKNRMVSINPSKSSCYISILNIIQGEADPTDVHKSLLRIRERRLASFIPWGPASIQVALTKKSPYIQNTHRVSGLMLANHTSVATLFKRIVQQY 394 The following BLAST results are available for this feature:
BLAST of CK938605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK938605 ID=CK938605; Name=CK938605; organism=Citrus sinensis; type=EST; length=834bpback to top |