CK938603

Overview
NameCK938603
Unique NameCK938603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_CYAA5 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain ATCC 51142) GN=ndk PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.121e-44
Identity = 86/149 (57.72%), Postives = 101/149 (67.79%), Query Frame = 2
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721
            +E T+IM+KPDGVQRGLVG+VI RFE               K+L+EEHY     +PFF  L+E+I S PVV M WEG GVVASARKLIG+T+PL AEPGTIRGD  V  GRN++HGSD+ E  +REI LWF E EL  W P    WL E
Sbjct:    1 MERTFIMIKPDGVQRGLVGEVIGRFEAKGFTLVGLKLMSVSKELAEEHYDVHKERPFFGSLVEFICSSPVVAMVWEGDGVVASARKLIGATNPLSAEPGTIRGDFGVSVGRNLIHGSDAIETAQREISLWFNEKELSSWEPTAKTWLYE 149          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.059e-44
Identity = 83/145 (57.24%), Postives = 102/145 (70.34%), Query Frame = 2
Query:  278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 712
            E T+I +KPDGVQRGLVG+++ RFE               + L+E+HY     +PFF  L+++ITSGPVV M WEG GV+ASARKLIG+T PL+AEPGTIRGDLAV  GRNV+HGSD+PE  + EIGLWF   EL  WTP+   W
Sbjct:    3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFDAAELNDWTPSDQTW 147          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_ACAM1 (Nucleoside diphosphate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=ndk PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43
Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 2
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721
            +E T++ VKPDGVQRGLVG++ISR+E               ++L+E+HY +   KPFF  L+++ITSGPVV M WEG GVVA+ARK+IG+T+PL +EPGTIRGD  +  GRN++HGSD+ E  +REI LWFK  EL  W+P    W+ E
Sbjct:    1 MERTFLAVKPDGVQRGLVGEIISRYEAKGFTLVGLKLMVVSRELAEQHYGEHKEKPFFSGLVDFITSGPVVAMVWEGKGVVAAARKIIGATNPLGSEPGTIRGDFGIDIGRNIIHGSDAVETAQREISLWFKSEELADWSPTLTSWIYE 149          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_NOSP7 (Nucleoside diphosphate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndk PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.795e-43
Identity = 80/149 (53.69%), Postives = 104/149 (69.80%), Query Frame = 2
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721
            +E T++ +KPDGVQRGLVG++I RFE            +  K+L+E+HY     +PFF  L+E+ITS PVV M WEG GVVASARK+IG+T+PL +EPGTIRGD  +  GRN++HGSD+PE  ++EI LWFK+ EL  W P    WL E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLKVSKELAEQHYGVHRERPFFGSLVEFITSSPVVAMVWEGDGVVASARKIIGATNPLTSEPGTIRGDFGINIGRNLIHGSDAPETAQQEIALWFKDEELVNWQPHITPWLHE 149          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SYNJB (Nucleoside diphosphate kinase OS=Synechococcus sp. GN=ndk PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.345e-43
Identity = 79/149 (53.02%), Postives = 101/149 (67.79%), Query Frame = 2
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721
            +E T+I +KPDGVQRGLVG +I R E            Q  ++L+E HY +   +PFF  L+++ITSGPVV M W+G GV+A+ARKLIG T+PL+AEPGTIRGD  +  GRN++HGSD  E  +REI LWF E EL  WTP    W+ E
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHKERPFFHSLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLEAEPGTIRGDFGIDIGRNLIHGSDGVETAQREIALWFDESELVSWTPVAQSWIYE 149          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_MICAN (Nucleoside diphosphate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=ndk PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.345e-43
Identity = 77/149 (51.68%), Postives = 102/149 (68.46%), Query Frame = 2
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721
            +E T++M+KPDGVQR LVG++I RFE            Q   +L+E+HY     +PFF  L+++ITS PVV M W+G GV+ASARK+IG+T+PL AEPGTIRGD  +  GRN++HGSD P+  K E+ LWF + EL  WTPA   W+ E
Sbjct:    1 MERTFLMIKPDGVQRNLVGEIIQRFETKGFTLVGLKMMQVSSELAEKHYAVHKERPFFRSLVDFITSSPVVAMVWQGEGVIASARKIIGATNPLNAEPGTIRGDFGISVGRNLIHGSDGPDTAKDEVSLWFSDAELANWTPAITPWVVE 149          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.063e-43
Identity = 79/145 (54.48%), Postives = 102/145 (70.34%), Query Frame = 2
Query:  278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 712
            E ++I +KPDGVQRGLVG+++ RFE               ++L+E+HY     +PFF  L+++ITSGPVV M WEG GV+ SARK+IG+T PL+AEPGTIRGDLA+  GRNV+HGSD+PE  + EIGLWF   EL  WTP+   W
Sbjct:    4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNPSELSDWTPSDQTW 148          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SYNP2 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndk PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.063e-43
Identity = 81/149 (54.36%), Postives = 100/149 (67.11%), Query Frame = 2
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721
            +E T++MVKPDGVQRGLVGDVI RFE               ++L+E+HY     +PFF  L+E+I S PVV M WEG G +A+ARK+IG+T+PL+AEPGTIRGD  V  GRN++HGSD P+    EI LWF E EL  W PA   WL E
Sbjct:    1 MERTFVMVKPDGVQRGLVGDVIRRFEAKGFKLVGLKLVSVSRELAEQHYGVHRERPFFGSLVEFIISVPVVAMVWEGKGAIAAARKIIGATNPLEAEPGTIRGDFGVDIGRNLIHGSDGPDTAASEIALWFSESELANWEPATKAWLYE 149          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSJ (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. japonica GN=NDKR PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.063e-43
Identity = 81/149 (54.36%), Postives = 105/149 (70.47%), Query Frame = 2
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721
            +E+++IM+KPDGVQRGL+GD+ISRFE               +  +++HY DL+ KPFFP L+EYI SGPVV M WEG  VVA+ R++IG+T P +A PGTIR D AV+ GRNV+HGSDS +NGK+EI LWF EG L +W      W+ E
Sbjct:    1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEG-LAEWRSNLHPWIYE 148          
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSI (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. indica GN=NDKR PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.063e-43
Identity = 81/149 (54.36%), Postives = 105/149 (70.47%), Query Frame = 2
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721
            +E+++IM+KPDGVQRGL+GD+ISRFE               +  +++HY DL+ KPFFP L+EYI SGPVV M WEG  VVA+ R++IG+T P +A PGTIR D AV+ GRNV+HGSDS +NGK+EI LWF EG L +W      W+ E
Sbjct:    1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFFLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEG-LAEWRSNLHPWIYE 148          
The following BLAST results are available for this feature:
BLAST of CK938603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_CYAA52.121e-4457.72Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]
NDK_SYNPX8.059e-4457.24Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_ACAM11.053e-4353.02Nucleoside diphosphate kinase OS=Acaryochloris mar... [more]
NDK_NOSP71.795e-4353.69Nucleoside diphosphate kinase OS=Nostoc punctiform... [more]
NDK_SYNJB2.345e-4353.02Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_MICAN2.345e-4351.68Nucleoside diphosphate kinase OS=Microcystis aerug... [more]
NDK_SYNS33.063e-4354.48Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNP23.063e-4354.36Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK1_ORYSJ3.063e-4354.36Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK1_ORYSI3.063e-4354.36Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_G03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938603 ID=CK938603; Name=CK938603; organism=Citrus sinensis; type=EST; length=856bp
GGGGGAGAGAGAGAGAGAAGAGAGAGAGATGGAGGGTGTAGGTGCGTTAG
GTGTGTCATCATCACCAACTCTGGTTGGGAAGATAAGTTGCAGCAGACGC
TTATCCTACAGCTCCAACAAGCTTACCCTGCGCACCACCAGCCACCTTGC
AGCATTCCACCCACAGTCCCATCTTTTCGTAAAATTCCCACCAGGTCCTC
AACGCAAAACAGTTGCTCGCAACTCCGACGAAACCGGCATCTTCCTTCCC
CACTTGGTCGCTTCCATGGAACAAGTTGAGGAGACTTACATTATGGTGAA
ACCAGATGGTGTTCAACGTGGTCTGGTTGGCGACGTTATTTCAAGGTTTG
AGAAGAAGGGATTCAAACTGACTGGCTTGAAGCTCTTTCAATGCCCGAAA
GATTTATCTGAGGAGCACTATAAGGATCTCAATTCCAAACCATTTTTTCC
TAAACTGATTGAGTACATTACTTCAGGACCAGTTGTATGTATGGCATGGG
AGGGTGCTGGTGTGGTGGCATCTGCACGTAAGTTAATAGGGTCAACGGAT
CCTCTTCAAGCTGAACCAGGCACAATAAGAGGGGATCTTGCTGTTCAAAC
TGGAAGGAATGTGGTCCATGGGAGTGACAGCCCTGAGAATGGCAAGCGTG
AAATAGGTCTGTGGTTCAAAGAAGGTGAGTTGTGTCAGTGGACACCAGCT
CAAGCACAGTGGTTAAGGGAGTAATATTCATCAAACACTTAACTATGGCG
GCGGGCACACTTTTGAAGAGTTCTCTTCTGAGCGATTATATTGAAATATC
AGAAGAATTTTATTGATTTGTGATCCTNNTAATTCAATGGTTAAACCGCT
TGTTAG
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