CK938603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_STAA1 (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=ndk PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.931e-35 Identity = 70/149 (46.98%), Postives = 94/149 (63.09%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E T++M+KPD VQR L+G+VISR E Q P +L+E HY + KPF+ LI +ITS PV M EG V +R +IGST+P +A PG+IRGDL + GRN++HGSDS E+ +REI LWF E E+ + + WL E Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE 149
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_METMJ (Nucleoside diphosphate kinase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=ndk PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.931e-35 Identity = 69/140 (49.29%), Postives = 94/140 (67.14%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 ++ T++MVKPDGVQRGLVG+++SRFE P+ E Y++ KPFFP L YI SGP MAWEG GVVA R+++G+T+P +A PG+IRG+ A+ GRNV+H SDSPE+ RE+G+ F GEL ++ Sbjct: 1 MDRTFVMVKPDGVQRGLVGEIVSRFEAKGLKLVGAKLELLPEGRVVEQYREHLEKPFFPGLKAYIMSGPCFLMAWEGKGVVAVVRRMVGATNPAEAAPGSIRGNFALDIGRNVIHASDSPESAARELGIHFAAGELVDYS 140
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_LISMH (Nucleoside diphosphate kinase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=ndk PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.931e-35 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWL 715 +E+TY+MVKPDGV+RGL+G++++R E Q ++L+E+HY + K FF LI +ITSGPV M EG +A+AR+++G T+PL+A+PGTIR D A+ T RNV+HGSDS E+ KREI L+F E+ + A W+ Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSLESAKREIQLFFAPQEILSYQKAIDTWI 147
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_DESHY (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=ndk PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.931e-35 Identity = 70/149 (46.98%), Postives = 95/149 (63.76%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E+T+IM+KPD VQRGLVG +I+RFE + L+E+HY + K FF ++YI S PVV M WEG VVA AR+L+G+T+P A PG+IRG + RNV+HGSDS + +REI L+F+ ELC + A +WL E Sbjct: 1 MEKTFIMLKPDAVQRGLVGQIIARFETKGCKLVGMKLMSVDQALAEQHYAEHKGKSFFEPTVQYIMSSPVVAMVWEGKNVVALARELMGATNPANANPGSIRGSFGMDISRNVIHGSDSVASAEREIALYFRPEELCDYRKAGEEWLSE 149
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_DESHD (Nucleoside diphosphate kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=ndk PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.931e-35 Identity = 70/149 (46.98%), Postives = 95/149 (63.76%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E+T+IM+KPD VQRGLVG +I+RFE + L+E+HY + K FF ++YI S PVV M WEG VVA AR+L+G+T+P A PG+IRG + RNV+HGSDS + +REI L+F+ ELC + A +WL E Sbjct: 1 MEKTFIMLKPDAVQRGLVGQIIARFEAKGCKLVGMKLMSVDQALAEQHYAEHKGKSFFEPTVQYIMSSPVVAMVWEGKNVVALARELMGATNPANANPGSIRGSFGMDISRNVIHGSDSVASAEREIALYFRPEELCDYRKAGEEWLSE 149
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_METTH (Nucleoside diphosphate kinase OS=Methanobacterium thermoautotrophicum GN=ndk PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.166e-34 Identity = 66/149 (44.30%), Postives = 101/149 (67.79%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E++++M+KPD V+R L G +I+RFE Q P+DL+ EHY++ KPFF L++YITS PV+ M EG ++ RK++G+T+P +A+ GTIRGD A++TGRN++H SDSPE+ +REI L+F E E+C + + + E Sbjct: 1 MEKSFVMLKPDAVKRRLAGRIIARFEDRGLKIVAFKMLQIPEDLAMEHYQEHREKPFFRDLVDYITSAPVIAMVIEGKDCISLIRKMVGATNPAEADLGTIRGDFALETGRNIIHASDSPESAEREIKLFFDESEICSYEMPDREMIYE 149
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_STACT (Nucleoside diphosphate kinase OS=Staphylococcus carnosus (strain TM300) GN=ndk PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.523e-34 Identity = 71/149 (47.65%), Postives = 93/149 (62.42%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E T++M+KPDGVQR LVG++I+R E K+ +E HY + KPF+ L+ +ITS PV M EG VV R +IG T+P +A PGTIRGDL + GRNV+HGSDS E+ KREI LWF+ EL +T +WL E Sbjct: 1 MERTFLMIKPDGVQRKLVGEIITRLEKKGLKLVGGKFMTVSKEKAETHYGEHADKPFYEGLVSFITSAPVFAMVVEGENVVEVTRNMIGKTNPTEAAPGTIRGDLGLTVGRNVIHGSDSVESAKREISLWFEPNELSVYTANDEEWLYE 149
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_METHJ (Nucleoside diphosphate kinase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=ndk PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.523e-34 Identity = 74/149 (49.66%), Postives = 93/149 (62.42%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E T++MVKPDGVQRGL+G+VI+RFE + P EHY + KPFFP L YITSGP M WEG +V +R +IG+T+P A PGTIRGD A++ G NV+HGSDS E REI + FK EL +T Q+L E Sbjct: 1 MERTFLMVKPDGVQRGLIGEVITRFERRGFKMVASRFEKLPDARVMEHYAEHVQKPFFPGLKAYITSGPCFLMVWEGKDIVKISRDMIGATNPAGAAPGTIRGDYALEIGMNVIHGSDSVETANREIAIHFKPEELVSYTRIDEQYLYE 149
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_LISW6 (Nucleoside diphosphate kinase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=ndk PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.523e-34 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWL 715 +E+TY+MVKPDGV+RGL+G+++++ E Q + L+E+HY + KPFF LI +ITSGPV M EG V+ AR+++G T+PL+A+ GTIR + AV T RNV+HGSDSPE+ KREI L+F+ E+ + A W+ Sbjct: 1 MEQTYVMVKPDGVERGLIGEIVAKIEKKGIKLVAGKLIQIDRKLAEQHYAEHIGKPFFEDLIGFITSGPVFAMVLEGDDVIKIARRMMGKTNPLEADAGTIRAEYAVHTNRNVIHGSDSPESAKREIQLFFEPHEILSYEKAVDIWV 147
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_STAAW (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MW2) GN=ndk PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.990e-34 Identity = 69/149 (46.31%), Postives = 94/149 (63.09%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E T++M+KPD VQR L+G+VISR E Q P +L+E HY + KPF+ LI +ITS PV M EG V +R +IGST+P +A PG+IRGDL + GRN++HGSDS ++ +REI LWF E E+ + + WL E Sbjct: 1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENEITSYASPRDAWLYE 149 The following BLAST results are available for this feature:
BLAST of CK938603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938603 ID=CK938603; Name=CK938603; organism=Citrus sinensis; type=EST; length=856bpback to top |