CK938603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.776e-42 Identity = 78/145 (53.79%), Postives = 98/145 (67.59%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 712 E T++ +KPDGVQRGLVG+++SRFE + L+E+HY +PFF L+++ITSGPV+ M WEG GV+ ARKLIGST PL A+PGTIRGDLA+ GRNV+HGSD PE EIGLWF+ EL W P+ W Sbjct: 4 ERTFLAIKPDGVQRGLVGEILSRFERKGFKLIALKQLIPSRALAEQHYGVHRERPFFKGLVDFITSGPVIAMIWEGEGVILGARKLIGSTKPLDADPGTIRGDLAIDIGRNVIHGSDGPETASFEIGLWFESSELSDWNPSDQLW 148
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PROM2 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ndk PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.776e-42 Identity = 79/148 (53.38%), Postives = 100/148 (67.57%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 E T+I +KPDGVQRG V ++I RFE KDL++ HY +PFF L+++I+SGPVV M WEG GV+ SARKLIG+T PL+AEPGTIRGDLA+ GRN++HGSD + K EI LWF E ELC+W + A+W E Sbjct: 4 ERTFIAIKPDGVQRGYVAEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWETSDAKWRSE 151
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.776e-42 Identity = 78/146 (53.42%), Postives = 100/146 (68.49%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 712 +E T++ +KPDGVQRGL+ +++ RFE K+L+E+HY +PFF L+++ITSGPVV M WEG GV+ASARKLIG+T PL+AEPGTIRGDLAV GRNV+HGSD + EI LWF+E EL W P+ W Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAW 148
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_GINCI (Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma cirratum PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.776e-42 Identity = 78/148 (52.70%), Postives = 102/148 (68.92%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 E T+I VKPDGVQR +VG+VI RFE Q PKDL E+HY +L+ KPF+PKLI+Y++SGPVV M WEG VV + R ++G T+P ++PGTIRGD +Q GRN++HGSDS E+ K+EI LWFK EL ++ W+ E Sbjct: 4 ERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPKLIKYMSSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAKKEISLWFKREELVEYQNCAQDWIYE 151
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.543e-42 Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 712 +E T++ +KPDGVQRGL+ +++ RFE K+L+E+HY +PFF L+++ITSGPV+ M WEG GV+ASARKLIG+T PL+AEPGTIRGDLAV GRNV+HGSD + EI LWF+E EL W P+ W Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAW 148
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 9.852e-42 Identity = 79/146 (54.11%), Postives = 98/146 (67.12%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 712 VE T++ +KPDGVQRGLVG+++ RFE K+L+E+HY +PFF L+ +ITSGPVV M WEG GV+ SARKLIG+T PL+AEPGTIRGDL + GRNV+HGSD PE EI LWF EL W P+ +W Sbjct: 3 VERTFLAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKW 148
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.852e-42 Identity = 77/149 (51.68%), Postives = 106/149 (71.14%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E+T+IM+KPDGVQRGLVG++I RFE + +E+HY DL++KPFF L++YI SGPVV M WEG GVV + RK+IG+T+PL++ PGTIRGD A+ GRNV+HGSD+ E+ ++EI LWF EG + +W + W+ E Sbjct: 1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEG-VAEWQSSLHSWIYE 148
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.287e-41 Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 E T++ +KPDGVQRG V D+I RFE K L+++HY +PFF L+E+I+SGPVV M WEG GV+ SARKLIG+T PL+AEPGTIRGDLA+ GRN++HGSD E K EI LWF + E+C W + ++W E Sbjct: 4 ERTFLAIKPDGVQRGYVSDIIGRFEKKGFKLVGLKQLIPTKQLAQDHYGVHRERPFFKDLVEFISSGPVVAMIWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFNQDEICDWETSDSEWRAE 151
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.287e-41 Identity = 78/149 (52.35%), Postives = 105/149 (70.47%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 +E+T+IM+KPDGVQRGLVG++I RFE + +E+HY DL++KPFF L+EYI SGPVV M WEG VV + RK+IG+T+P ++ PGTIRGD A+ GRNV+HGSD+ E+ K+EIGLWF EG + W+ + W+ E Sbjct: 1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEG-VANWSSSLHPWIYE 148
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.680e-41 Identity = 78/148 (52.70%), Postives = 100/148 (67.57%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 721 E T+I +KPDGVQRG V ++I RFE KDL++ HY +PFF L+++I+SGPVV M WEG GV+ SARKLIG+T PL+AEPGTIRGDLA+ GRN++HGSD + K EI LWF E ELC+W + ++W E Sbjct: 4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWYTSDSKWRSE 151 The following BLAST results are available for this feature:
BLAST of CK938603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938603 ID=CK938603; Name=CK938603; organism=Citrus sinensis; type=EST; length=856bpback to top |