CK938603

Overview
NameCK938603
Unique NameCK938603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BRUMB (Nucleoside diphosphate kinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T+ M+KPD  +R L G +I++ E               +  +E  Y     +PFF +L+E+++SGP V    EG   +A  R+++G+T+P  A+ GTIR   A+  G N VHGSD+PE    EI  WF   E+
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWFSGTEI 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BRUC2 (Nucleoside diphosphate kinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T+ M+KPD  +R L G +I++ E               +  +E  Y     +PFF +L+E+++SGP V    EG   +A  R+++G+T+P  A+ GTIR   A+  G N VHGSD+PE    EI  WF   E+
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWFSGTEI 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BRUAB (Nucleoside diphosphate kinase OS=Brucella abortus GN=ndk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T+ M+KPD  +R L G +I++ E               +  +E  Y     +PFF +L+E+++SGP V    EG   +A  R+++G+T+P  A+ GTIR   A+  G N VHGSD+PE    EI  WF   E+
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWFSGTEI 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BRUA2 (Nucleoside diphosphate kinase OS=Brucella abortus (strain 2308) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T+ M+KPD  +R L G +I++ E               +  +E  Y     +PFF +L+E+++SGP V    EG   +A  R+++G+T+P  A+ GTIR   A+  G N VHGSD+PE    EI  WF   E+
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWFSGTEI 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BRUA1 (Nucleoside diphosphate kinase OS=Brucella abortus (strain S19) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 49/136 (36.03%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T+ M+KPD  +R L G +I++ E               +  +E  Y     +PFF +L+E+++SGP V    EG   +A  R+++G+T+P  A+ GTIR   A+  G N VHGSD+PE    EI  WF   E+
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWFSGTEI 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_XANOR (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae GN=ndk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T  ++KPD V + ++G++ SRFE            Q  +  +E  Y     +PFF  L+E++ SGPV+  A EG   VA+ R L+G+T+P  A PGTIR D A     N  HGSDS EN   E+  +F   E+
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFFAATEV 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_XANOM (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T  ++KPD V + ++G++ SRFE            Q  +  +E  Y     +PFF  L+E++ SGPV+  A EG   VA+ R L+G+T+P  A PGTIR D A     N  HGSDS EN   E+  +F   E+
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFFAATEV 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_XANCP (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris GN=ndk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T  ++KPD V + ++G++ SRFE            Q  +  +E  Y     +PFF  L+E++ SGPV+  A EG   VA+ R L+G+T+P  A PGTIR D A     N  HGSDS EN   E+  +F   E+
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFFAATEV 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_XANCB (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T  ++KPD V + ++G++ SRFE            Q  +  +E  Y     +PFF  L+E++ SGPV+  A EG   VA+ R L+G+T+P  A PGTIR D A     N  HGSDS EN   E+  +F   E+
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFFAATEV 138
[Close]
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_XANC8 (Nucleoside diphosphate kinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2 
Query:  275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682
            +E T  ++KPD V + ++G++ SRFE            Q  +  +E  Y     +PFF  L+E++ SGPV+  A EG   VA+ R L+G+T+P  A PGTIR D A     N  HGSDS EN   E+  +F   E+
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFFAATEV 138
The following BLAST results are available for this feature:
BLAST of CK938603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_BRUMB3.295e-2136.03Nucleoside diphosphate kinase OS=Brucella melitens... [more]
NDK_BRUC23.295e-2136.03Nucleoside diphosphate kinase OS=Brucella canis (s... [more]
NDK_BRUAB3.295e-2136.03Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_BRUA23.295e-2136.03Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_BRUA13.295e-2136.03Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_XANOR4.303e-2138.24Nucleoside diphosphate kinase OS=Xanthomonas oryza... [more]
NDK_XANOM4.303e-2138.24Nucleoside diphosphate kinase OS=Xanthomonas oryza... [more]
NDK_XANCP4.303e-2138.24Nucleoside diphosphate kinase OS=Xanthomonas campe... [more]
NDK_XANCB4.303e-2138.24Nucleoside diphosphate kinase OS=Xanthomonas campe... [more]
NDK_XANC84.303e-2138.24Nucleoside diphosphate kinase OS=Xanthomonas campe... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004440_G03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938603 ID=CK938603; Name=CK938603; organism=Citrus sinensis; type=EST; length=856bp
GGGGGAGAGAGAGAGAGAAGAGAGAGAGATGGAGGGTGTAGGTGCGTTAG
GTGTGTCATCATCACCAACTCTGGTTGGGAAGATAAGTTGCAGCAGACGC
TTATCCTACAGCTCCAACAAGCTTACCCTGCGCACCACCAGCCACCTTGC
AGCATTCCACCCACAGTCCCATCTTTTCGTAAAATTCCCACCAGGTCCTC
AACGCAAAACAGTTGCTCGCAACTCCGACGAAACCGGCATCTTCCTTCCC
CACTTGGTCGCTTCCATGGAACAAGTTGAGGAGACTTACATTATGGTGAA
ACCAGATGGTGTTCAACGTGGTCTGGTTGGCGACGTTATTTCAAGGTTTG
AGAAGAAGGGATTCAAACTGACTGGCTTGAAGCTCTTTCAATGCCCGAAA
GATTTATCTGAGGAGCACTATAAGGATCTCAATTCCAAACCATTTTTTCC
TAAACTGATTGAGTACATTACTTCAGGACCAGTTGTATGTATGGCATGGG
AGGGTGCTGGTGTGGTGGCATCTGCACGTAAGTTAATAGGGTCAACGGAT
CCTCTTCAAGCTGAACCAGGCACAATAAGAGGGGATCTTGCTGTTCAAAC
TGGAAGGAATGTGGTCCATGGGAGTGACAGCCCTGAGAATGGCAAGCGTG
AAATAGGTCTGTGGTTCAAAGAAGGTGAGTTGTGTCAGTGGACACCAGCT
CAAGCACAGTGGTTAAGGGAGTAATATTCATCAAACACTTAACTATGGCG
GCGGGCACACTTTTGAAGAGTTCTCTTCTGAGCGATTATATTGAAATATC
AGAAGAATTTTATTGATTTGTGATCCTNNTAATTCAATGGTTAAACCGCT
TGTTAG
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