CK938603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_ENTS8 (Nucleoside diphosphate kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.252e-20 Identity = 50/140 (35.71%), Postives = 74/140 (52.86%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KP+ V + ++G + +RFE + + Y + KPFF L+E++TSGP+V E V R L+G+T+P A GT+R D A N HGSDS E+ REI +F EGE+C T Sbjct: 3 IERTFSIIKPNAVAKNVIGSIFARFESAGFKIIGTKMLHLTVEQARGFYAEHEGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSVESANREIAYFFGEGEICPRT 142
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_ENT38 (Nucleoside diphosphate kinase OS=Enterobacter sp. (strain 638) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.252e-20 Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KP+ V + ++G + +RFE + + Y + + KPFF L+E++TSGP+V E V R L+G+T+P A GT+R D A N HGSDS E+ REI +F EGE+C T Sbjct: 3 IERTFSIIKPNAVAKNVIGSIFARFESAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSVESAAREIAYFFAEGEVCPRT 142
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_BURP8 (Nucleoside diphosphate kinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.252e-20 Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKE 673 +E T ++KPD V + ++G + SRFE + +E+ Y ++PFF L+E++ SGPV EG G + R L+G+TDP +AE GTIR D A N VHGSD+PE E+ +F E Sbjct: 3 IERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVASRMVHLSRADAEKFYAVHAARPFFKDLVEFMISGPVQVQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETAAVEVAFFFPE 135
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SALPC (Nucleoside diphosphate kinase OS=Salmonella paratyphi C (strain RKS4594) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20 Identity = 49/140 (35.00%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KP+ V + ++G + +RFE + + Y + + KPFF L+E++TSGP++ E V R L+G+T+P A GT+R D A N HGSDS E+ +REI +F EGE+C T Sbjct: 3 IERTFSIIKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPILVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSLESAQREIAFFFGEGEVCPRT 142
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_SALCH (Nucleoside diphosphate kinase OS=Salmonella choleraesuis GN=ndk PE=3 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20 Identity = 49/140 (35.00%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWT 694 +E T+ ++KP+ V + ++G + +RFE + + Y + + KPFF L+E++TSGP++ E V R L+G+T+P A GT+R D A N HGSDS E+ +REI +F EGE+C T Sbjct: 3 IERTFSIIKPNAVAKNVIGSIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPILVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSLESAQREIAFFFGEGEVCPRT 142
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_PSEE4 (Nucleoside diphosphate kinase OS=Pseudomonas entomophila (strain L48) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20 Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 V+ T+ ++KPD V + ++G + +RFE Q K +E Y + +++ FF L+ ++TSGPVV EG +A R+L+G+T+P +A PGTIR D A N VHGSDS REI +F E+ Sbjct: 3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSARGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAPGTIRADFAESIDANAVHGSDSEAAAAREIAYFFAATEV 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_NITEU (Nucleoside diphosphate kinase OS=Nitrosomonas europaea GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20 Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 VE T ++KPD V + ++G + +RFE + +E Y +PFF L+E++ SGPV+ EG +A R+L+G+TDP +AE GTIR D A N VHGSD+PE EI +F E+ Sbjct: 3 VERTLSIIKPDAVAKNVIGQIYARFEAAGLKVVAARMAHLSRVEAENFYAIHRERPFFKDLVEFMISGPVMIQVLEGENAIARNRELMGATDPRKAEKGTIRADFAESIDANAVHGSDAPETAVVEIACFFPSLEI 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_METC4 (Nucleoside diphosphate kinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20 Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 2 Query: 278 EETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGEL 682 E T+ ++KPD +R + G V + E + ++ +E+ Y+ +PFF +L+E++TSGPVV EG VA R+++G+T+P QA GTIR A G N VHGSDS +N + EI +F + ++ Sbjct: 4 ERTFSILKPDATRRNITGAVNAVIEAAGLRIVGQRRIRMTREQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNARLEIAQFFNDADI 138
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_LARHH (Nucleoside diphosphate kinase OS=Laribacter hongkongensis (strain HLHK9) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20 Identity = 52/137 (37.96%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELC 685 +E T +VKPD V + ++G + RFE + +E Y +PFF L+E++ SGPV+ EG V R+L+G+TDP +A+ GTIR D A N VHGSDS EN EI +F E+C Sbjct: 3 IERTLSIVKPDAVAKNVIGKIYDRFESNGLKIVAAKMKHLSRREAEGFYAVHKERPFFNDLVEFMISGPVMVQVLEGENAVLKNRELMGATDPKKADAGTIRADFAESIDANAVHGSDSLENAAIEIAYFFSATEVC 139
BLAST of CK938603 vs. ExPASy Swiss-Prot
Match: NDK_DECAR (Nucleoside diphosphate kinase OS=Dechloromonas aromatica (strain RCB) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 2 Query: 275 VEETYIMVKPDGVQRGLVGDVISRFEXXXXXXXXXXXXQCPKDLSEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWF 667 +E T ++KPD V + ++G + SRFE + + + Y +PFF L+ ++TSGPV+ A EG +A R+L+G+TDP +A+ GTIR D A N VHGSD+PE EI +F Sbjct: 3 IERTLSIIKPDAVAKNVIGKIYSRFESNGLKVIAARMTWLSEQEAGQFYSVHKERPFFKDLVSFMTSGPVMIQALEGENAIAKNRELMGATDPKKADAGTIRADFAESIDANAVHGSDAPETAAVEIAFFF 133 The following BLAST results are available for this feature:
BLAST of CK938603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938603 ID=CK938603; Name=CK938603; organism=Citrus sinensis; type=EST; length=856bpback to top |