CK938581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_CHICK (60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.421e-17 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F+R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_BOVIN (60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.421e-17 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F+R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_DANRE (60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.130e-17 Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F R +IRE+ GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNTLAAMR 98
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.045e-17 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSRAPGGGEKK 231 G SK F+R +IRE+ GFAP+E+R ELLKV KDKRALK K++LGTH R K+KR+E+SN L R ++K Sbjct: 31 GALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALKFIKKRLGTHLRGKRKRDELSNVLVAQRKAAAHKEK 106
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_CAEEL (60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 7.045e-17 Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G ASK+ +R ++REI GFAPYE+R+ E+L++ KDKRALK KR++GTH+RAK KREE+ N + R Sbjct: 33 GVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQR 100
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_DROME (60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.201e-17 Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 13 SKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 ++ FMR ++RE+ G APYEKR ELLKV KDKRALK KR+LGTH RAK+KREE+SN L + R Sbjct: 44 TRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLR 108
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_RAT (60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.202e-16 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ +K F+R +IRE+ FAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 31 GRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36A_SCHPO (60S ribosomal protein L36-A OS=Schizosaccharomyces pombe GN=rpl36a PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.566e-16 Identity = 37/68 (54.41%), Postives = 56/68 (82.35%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G+ SKR F+R+++RE+AGFAPYE+R+ EL++ +DKRA K+AK++LGT KRAK K EE+++ ++ SR Sbjct: 29 GQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15 Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE 177 GK SKR HF+R +IRE+AGF PYEKRITELLKVGKDKRALKV + K+G H + K+ E Sbjct: 34 GKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
BLAST of CK938581 vs. ExPASy Swiss-Prot
Match: RL36B_SCHPO (60S ribosomal protein L36-B OS=Schizosaccharomyces pombe GN=rpl36b PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15 Identity = 37/68 (54.41%), Postives = 55/68 (80.88%), Query Frame = 1 Query: 4 GKASKRVHFMRTVIREIAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 207 G SKR F+R+++RE+AGFAPYE+R+ EL++ +DKRA K+AK++LGT KRAK K EE+++ ++ SR Sbjct: 29 GHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96 The following BLAST results are available for this feature:
BLAST of CK938581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938581 ID=CK938581; Name=CK938581; organism=Citrus sinensis; type=EST; length=298bpback to top |