EY649567

Overview
NameEY649567
Unique NameEY649567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_YEAST (Autophagy-related protein 8 OS=Saccharomyces cerevisiae GN=ATG8 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.081e-36
Identity = 77/115 (66.96%), Postives = 85/115 (73.91%), Query Frame = 1
Query:   97 KSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            KS FK                  + +RIPVI EKAE+SDIP IDK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MS IY E KD+DGFLYVTYSGENTFG
Sbjct:    2 KSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_YEAS7 (Autophagy-related protein 8 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.081e-36
Identity = 77/115 (66.96%), Postives = 85/115 (73.91%), Query Frame = 1
Query:   97 KSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            KS FK                  + +RIPVI EKAE+SDIP IDK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MS IY E KD+DGFLYVTYSGENTFG
Sbjct:    2 KSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.208e-35
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            + DR+PVI EKAE SDI  IDK+KYLVP DL+VGQFVYVIRKRIKL +EKAIFIF++++LPPT A+MSTIY+E KDEDGFLYV YSGENTFG
Sbjct:   25 FNDRLPVICEKAENSDIQEIDKRKYLVPGDLSVGQFVYVIRKRIKLPSEKAIFIFINDILPPTAALMSTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_VANPO (Autophagy-related protein 8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.577e-35
Identity = 75/115 (65.22%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   97 KSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            KS+FK                  + +RIPVI EKAE+SDIP IDK+KYLVP+DLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MS +Y E KD+DGFLYVTYSGENTFG
Sbjct:    2 KSSFKSEYPFEKRKTESERITEKFQNRIPVICEKAEKSDIPEIDKRKYLVPSDLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.577e-35
Identity = 70/90 (77.78%), Postives = 82/90 (91.11%), Query Frame = 1
Query:  172 DRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            DRIPVI EK E SDIP IDK+KYLVP+DLTVGQFVYVIRKRI+L +EKAIFIFV+++LPPT ++MSTIY++ KDEDGFLY+ YSGENTFG
Sbjct:   27 DRIPVICEKVEESDIPEIDKRKYLVPSDLTVGQFVYVIRKRIQLPSEKAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTFG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.691e-35
Identity = 74/115 (64.35%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   97 KSNFKIXXXXXXXXXXXXXXXXXYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            KS+FK                  + +RIPVI EKAE+SDIP +DK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT ++MS +Y E KD+DGFLYVTYSGENTFG
Sbjct:    2 KSSFKSEYPFEKRKAESERISEKFQNRIPVICEKAEKSDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34
Identity = 67/92 (72.83%), Postives = 81/92 (88.04%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            + +R+PVI E+AE+SDIP +D++KYLVPADLTVGQFVYVIR+RIKL AEKAIFIFV++ LPPT A+M  +Y E KD+DGFLYV YSGENTFG
Sbjct:   24 FENRVPVICERAEKSDIPEVDRRKYLVPADLTVGQFVYVIRRRIKLPAEKAIFIFVNDTLPPTAALMFAVYQEHKDKDGFLYVKYSGENTFG 115          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.928e-33
Identity = 68/92 (73.91%), Postives = 80/92 (86.96%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            + +RIPVI E+  +SDIP IDK+KYLVP DLTVGQFVYVIRKRIKL AEKAIFIFV++ LPPT A+MS+IY + KD+DGFLYV+YS ENTFG
Sbjct:   25 FHNRIPVICERGGKSDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: ATG8_DICDI (Autophagy-related protein 8 OS=Dictyostelium discoideum GN=atg8 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.928e-33
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRI-KLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            Y DRIPVIVEKA RSD P IDKKKYLVPAD+TVG+FVY IRK + K+SAEKAI++FV+N +PPT A++S IY+  KDEDGFLY+TYSGENTFG
Sbjct:   27 YLDRIPVIVEKAPRSDAPDIDKKKYLVPADITVGKFVYEIRKHMTKVSAEKAIYLFVNNTIPPTAALISQIYERYKDEDGFLYITYSGENTFG 119          
BLAST of EY649567 vs. ExPASy Swiss-Prot
Match: GBRL2_RAT (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Rattus norvegicus GN=Gabarapl2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.903e-30
Identity = 59/92 (64.13%), Postives = 75/92 (81.52%), Query Frame = 1
Query:  166 YPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 441
            YPDR+PVIVEK   S I  IDK+KYLVP+D+TV QF+++IRKRI+L +EKAIF+FVD  +P +   M  +Y+++KDEDGFLYV YSGENTFG
Sbjct:   25 YPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of EY649567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_YEAST7.081e-3666.96Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_YEAS77.081e-3666.96Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_DEBHA1.208e-3577.17Autophagy-related protein 8 OS=Debaryomyces hansen... [more]
ATG8_VANPO1.577e-3565.22Autophagy-related protein 8 OS=Vanderwaltozyma pol... [more]
ATG8_PICAN1.577e-3577.78Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_CANGA2.691e-3564.35Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_ASHGO2.975e-3472.83Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]
ATG8_KLULA1.928e-3373.91Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
ATG8_DICDI1.928e-3374.19Autophagy-related protein 8 OS=Dictyostelium disco... [more]
GBRL2_RAT9.903e-3064.13Gamma-aminobutyric acid receptor-associated protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-A11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649567 ID=EY649567; Name=EY649567; organism=Citrus sinensis; type=EST; length=677bp
CCACGCGTCCGGGTTAATCCAATCTTCTTTAATCAGCAACTGCACGACGA
CGATAGCTTCATTGTATATTATATATGATAATTAACGACAATGAGTAAAA
GCAACTTCAAGATTGAGCATGAATTCGAGAAAAGGCGTGCTGAGGCGGAA
AGAATTAGGGAGAAATACCCAGATAGAATTCCGGTGATAGTGGAAAAGGC
TGAGAGAAGTGATATTCCTACAATTGACAAGAAAAAATATTTAGTCCCTG
CTGACTTAACAGTGGGTCAGTTTGTGTATGTGATACGGAAGAGAATTAAA
CTGAGCGCAGAAAAGGCAATCTTTATATTTGTGGACAATGTTCTCCCGCC
TACAGGAGCAATAATGTCTACCATATATGATGAAAAGAAGGATGAAGATG
GGTTTCTCTATGTTACTTACAGTGGTGAAAACACATTTGGATAGCATAAT
CTGCCGCTACCCTTTTTCCTCTACCAACGTTTCGTTTGTTAATCTACTCA
TCTTGAATTTAGTGTTTCTGTTTTCTGGCTTTGTGCCGGTCATAATCCGG
CTTCTTATTTACATGACCTTTTATGCTTGTATATAGCCGGTTCAAACTAT
GTGGTATCAGACTGATGATTGCGAATAATTTAAATTCGATGGAAGTGTGG
TATCAATCCCTCAAAAAAAAAAAAAAA
back to top