FC921791

Overview
NameFC921791
Unique NameFC921791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length270
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.083e-25
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 2
Query:    2 LDLLQVIAKAGPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LDLL++I KAG GAF+SP  +A+ L   N++AH++LDRILRLL SY++L C L TLPDGGV+RLYGLAPVCKFLTKNE
Sbjct:   40 LDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNE 117          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.847e-25
Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 2
Query:    2 LDLLQVIAKAGPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LDLL+++AKAGPGA + P  IAS LP KN +A ++LDRILRLLASYS+L CSL  LPDG VERLYGLA VCKFLT+NE
Sbjct:   41 LDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNE 118          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.847e-25
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 2
Query:    2 LDLLQVIAKAGPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKN 232
            LDLL+++AKAGPGA +SP  +A+ LP KN +A ++LDR+LRLLA+YSVLNC+L TLPDG VERLY LAPVCK LTKN
Sbjct:   38 LDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKN 114          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.165e-25
Identity = 52/78 (66.67%), Postives = 66/78 (84.62%), Query Frame = 2
Query:    2 LDLLQVIAKAGPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LDLL+++A+AGPGA+++P  +AS LP +N DA ++LDRI RLLASYSVL C+L  LP+G VERLYGLAP+CKFL KNE
Sbjct:   24 LDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNE 101          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.759e-24
Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 2
Query:    2 LDLLQVIAKA---GPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LD+L+++AK+   G GA++SP  IA+ LP  N DA ++LDR+LRLLASYSV+ CSL  LPDG VERLYGLAPVCKFLTKNE
Sbjct:   44 LDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNE 124          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.707e-21
Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 2
Query:    2 LDLLQVIAKAGPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LDLL++IAKAGPGA +SP  IAS LP  N DA ++LDR+LRLLA Y +L CS+ T  DG V+RLYGLA V K+L KNE
Sbjct:   42 LDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNE 119          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 3.985e-20
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:    2 LDLLQVIAKA-GPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LD+L+++AK+  P  ++SP  IA+ LP  N +A ++LDR+LRLLASYSV+  +L  LP G VERLYGLAPVCKFLTKNE
Sbjct:   44 LDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNE 122          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.877e-20
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 2
Query:    2 LDLLQVIAKAGPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LDLL+++AK G    MSP  IAS LP KN +A ++LDRILRLL SYSVL CS   L   GVER+YGL PVCK+LTKNE
Sbjct:   42 LDLLEIMAKNGSP--MSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNE 117          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.186e-17
Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 2
Query:    2 LDLLQVIAKAGPGAFMSPKPIASPLPPKNS-DAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LDLL+ IAKAGP   +S   + + LP  N+ +A +++DRI  LLASYSVL C+L    DG  ER YGLAPVCKFL KN+
Sbjct:   32 LDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKND 110          
BLAST of FC921791 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.955e-15
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 2
Query:    2 LDLLQVIAKAGPGAFMSPKPIASPLPPKNSDAHILLDRILRLLASYSVLNCSLHTLPDGGVERLYGLAPVCKFLTKNE 235
            LDLL++I   G    MSP  IAS LP  N DA  ++DRILRLL+ YSV+ CS+ ++ D   +R+YGLAPVCK+LTKN+
Sbjct:   23 LDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDD---QRVYGLAPVCKYLTKNQ 95          
The following BLAST results are available for this feature:
BLAST of FC921791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
COMT2_OCIBA1.083e-2569.23Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT2_POPTM1.847e-2571.79Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_CAPAN1.847e-2570.13Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_EUCGL9.165e-2566.67Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_CLABR7.759e-2466.67Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_MEDSA4.707e-2164.10Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
IEMT_CLABR3.985e-2060.76(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
OMT1_ARATH8.877e-2064.10Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_ZINEL9.186e-1755.70Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT2_CHRAE2.955e-1555.13Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionC06052D07T7 RindPdigS Citrus sinensis cDNA clone C06052D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921791 ID=FC921791; Name=FC921791; organism=Citrus sinensis; type=EST; length=270bp
GCTTGATCTTTTACAGGTCATTGCTAAAGCTGGCCCCGGTGCTTTCATGT
CTCCCAAACCAATAGCTTCCCCGCTGCCCCCAAAGAACTCAGATGCCCAT
ATCCTGCTCGATCGCATATTGCGTCTTTTAGCTAGCTACTCAGTTCTTAA
CTGCTCTTTGCACACTCTCCCTGATGGCGGAGTTGAGAGGCTTTATGGCC
TTGCACCCGTCTGTAAATTCCTTACCAAAAATGAATTATTTTTTTTCACT
TTCCGACATTTGTCTCCTGT
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