CK938506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.131e-20 Identity = 63/180 (35.00%), Postives = 97/180 (53.89%), Query Frame = 2 Query: 65 TNQLMALPN--QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTSHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 589 T++ A PN Q FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ N R V+ ++ ++ N L + E SAK+ N FL +A+KL Sbjct: 2 TSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.477e-20 Identity = 56/164 (34.15%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQVTSH--RKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 598 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.477e-20 Identity = 56/164 (34.15%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQVTSH--RKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 598 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.477e-20 Identity = 56/164 (34.15%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQVTSH--RKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 598 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB19_MOUSE (Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.477e-20 Identity = 58/178 (32.58%), Postives = 99/178 (55.62%), Query Frame = 2 Query: 89 NQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTSHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLH 610 + + VDY FK++++GD GKT V+ +G + + + TIGV+ + K++ WDTAGQE+F + YY AII +D+T R T+++VP W ++ + N+ I+L GNK D+ + R V + + +K+ L E SAK + N ++ F+ +A++L +LH Sbjct: 10 SDENVDY-LFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELIARNSLH 186
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB7_SOYBN (Ras-related protein Rab7 OS=Glycine max PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.929e-20 Identity = 53/188 (28.19%), Postives = 96/188 (51.06%), Query Frame = 2 Query: 119 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVTS--HRKKNLQYYEISAKSNYNFEKPFLYLARKLAG---DPNLHFVESPALAPPE 643 K++++GD G GKT+ + +++ +F ++Y+ TIG + + + + WDTAGQE+F L +Y C ++++DV ++ + WH + + P +L GNK+D+ +R V K+ K N+ Y+E SAK +YN + FL +A+ + +++F P A PE Sbjct: 10 KVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPFILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPE 197
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB23_MOUSE (Ras-related protein Rab-23 OS=Mus musculus GN=Rab23 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.929e-20 Identity = 51/160 (31.87%), Postives = 86/160 (53.75%), Query Frame = 2 Query: 113 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQ-VKAKQVTSHRKK-NLQYYEISAKSNYNFEKPFLYLARK 586 + K+V+VG+G GK++ ++R+ G F K Y+ TIGV+ N +R WDTAGQE+F + YY Q +++F T R +++ + +W + +IP L NK+D+ + +K ++ K+ L++Y S K + N + F YLA K Sbjct: 9 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEK 168
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.519e-20 Identity = 59/160 (36.88%), Postives = 87/160 (54.37%), Query Frame = 2 Query: 119 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDV-KNRQVKAKQVTSHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 589 K+V++G GKT R++ G F K+ TIG KI++ WD+AGQ++F L YY AI++FD+T + T+ V W +L + E I +VLCGNK+D+ +NRQVK++ + + N Y E SAK N E FL + +KL Sbjct: 11 KVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.519e-20 Identity = 57/176 (32.39%), Postives = 95/176 (53.98%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTSHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 631 FK++++GD GKT V+ +G + + + TIGV+ + K++ WDTAGQE+F + YY AII +D+T R T++++P W ++ + N+ I+L GNK D+ + R V + + +K L E SAK + N E+ F+ +A++L +LH AL Sbjct: 18 FKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGESAL 193
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.290e-20 Identity = 61/172 (35.47%), Postives = 93/172 (54.07%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE--NIPIVLCGNKVDVK-NRQVKAKQVTSHRKKN-LQYYEISAKSNYN----FEKPFLYLARKLAGDPNL 607 FK ++VGD GK+ + + + F + TIGVE N +I+ WDTAGQEKF + YY CA+I++D+T R +++++ +W D CR ++ VL GNK D++ NRQV + +KN L ++E SAK+ N FEK + +KL +P L Sbjct: 25 FKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTD-CRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGL 195 The following BLAST results are available for this feature:
BLAST of CK938506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938506 ID=CK938506; Name=CK938506; organism=Citrus sinensis; type=EST; length=802bpback to top |