CK938506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.290e-20 Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTSHRKKNLQYYEISAKSNYNFEKPFLYLARKL 589 FKL+++GD G GKT + R F + TIG+++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+++++V KAK R+ ++++E SAK+N N EK FL LA + Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB26_DROME (Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.297e-20 Identity = 53/167 (31.74%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 104 DYPSFKLVIVGDGGTGKTTFVKRHLTGEFEK-KYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKAKQVTSH---RKKNLQYYEISAKSNYNFEKPFLYLARKL 589 D + K +++GD G GKT+F+ ++ TGEF + T+G+ + + +++ WDTAGQE+F + YY ++++DVT + TY N+ W ++ E++ IVL GNK D + + K+ R+ N+ + E SAK+ N E F +AR+L Sbjct: 187 DTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQVKREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQL 353
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.297e-20 Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 2 Query: 95 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTSHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLH 610 + VDY FK++++GD GKT V+ +G + + + TIGV+ + K++ WDTAGQE+F + YY AII +D+T R T+++VP W ++ + N+ I+L GNK D+ + R V + + +K L E SAK + N ++ F+ +A++L +LH Sbjct: 12 ENVDY-LFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLH 186
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.612e-20 Identity = 62/180 (34.44%), Postives = 96/180 (53.33%), Query Frame = 2 Query: 65 TNQLMALPN--QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDV-KNRQVKAKQVTSHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 589 T++ A PN Q FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T + T+ TW ++L R +I I L GNK D+ R V+ ++ ++ N L + E SAK+ N FL +A+KL Sbjct: 2 TSRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB7_VIGAC (Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.330e-20 Identity = 52/188 (27.66%), Postives = 96/188 (51.06%), Query Frame = 2 Query: 119 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVTS--HRKKNLQYYEISAKSNYNFEKPFLYLARKLAG---DPNLHFVESPALAPPE 643 K++++GD G GKT+ + +++ +F ++Y+ TIG + + + + WDTAGQE+F L +Y C ++ +DV ++ + WH + + + P +L GNK+D+ +R V K+ K N+ Y+E SAK ++N + FL +A+ + +++F P A PE Sbjct: 10 KVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPE 197
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.573e-20 Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTSHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 589 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N R V ++ S+ N L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.573e-20 Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTSHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 589 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N R V ++ S+ N L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.573e-20 Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTSHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 589 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N R V ++ S+ N L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 9.573e-20 Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTSHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 589 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N R V ++ S+ N L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of CK938506 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.573e-20 Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 2 Query: 116 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKN-RQVKAKQVTSHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 589 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N R V ++ S+ N L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181 The following BLAST results are available for this feature:
BLAST of CK938506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938506 ID=CK938506; Name=CK938506; organism=Citrus sinensis; type=EST; length=802bpback to top |