CK938493

Overview
NameCK938493
Unique NameCK938493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: STI1L_PLAF7 (STI1-like protein OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0324 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.003e-24
Identity = 62/192 (32.29%), Postives = 96/192 (50.00%), Query Frame = 3
Query:   93 DMADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQDDFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLL 668
            D A+E K KGN  F + D+  A + + EAI  +P++  LYSNR+AA   L  Y  AL D  K +EL P + K YSR G  H  ++DY +A+ +Y KGL++DPNN+                             S     E + K  ADP  +  +    F+ +++ +  NPN+++ Y+KD ++   L  L+
Sbjct:  376 DKAEEHKNKGNEYFKNNDFPNAKKEYDEAIRRNPNDAKLYSNRAAALTKLIEYPSALEDVMKAIELDPTFVKAYSRKGNLHFFMKDYYKALQAYNKGLELDPNNKECLEGYQRCAFKIDEMSK-----------SEKVDEEQFKKSMADPEIQQIISDPQFQIILQKLNENPNSISEYIKDPKIFNGLQKLI 556          

HSP 2 Score: 102.064 bits (253), Expect = 4.142e-21
Identity = 69/209 (33.01%), Postives = 96/209 (45.93%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQD-----DFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNVKFKGPTGGDDVE 710
            A   K  GN  F  G YE AV++F++AI+  P +HVLYSN S A ASL  + +AL  A K + +K DW KGY R G A  GL+    A  +Y +GL IDPNN+                         N   +A     +   +  DP  +SY +++     +  N +K I  NP N+ + L       + GV     FK    G+D E
Sbjct:    7 AQRLKELGNKCFQEGKYEEAVKYFSDAITNDPLDHVLYSNLSGAFASLGRFYEALESANKCISIKKDWPKGYIRKGCAEHGLRQLSNAEKTYLEGLKIDPNNK-------------SLQDALSKVRNENMLENAQLIAHLNNIIENDPQLKSYKEENSNYPHELLNTIKSINSNPMNIRIILSTCHPKISEGVEKFFGFKFTGEGNDAE 202          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: STI1L_PLAFA (STI1-like protein (Fragment) OS=Plasmodium falciparum PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.142e-21
Identity = 69/209 (33.01%), Postives = 96/209 (45.93%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNEXXXXXXXXXXXXXXXXXXXXXXXXXNPFGSAFAGPEMWAKLTADPTTRSYLDQD-----DFRNMMKDIQRNPNNLNLYLKDQRVMQALGVLLNVKFKGPTGGDDVE 710
            A   K  GN  F  G YE AV++F++AI+  P +HVLYSN S A ASL  + +AL  A K + +K DW KGY R G A  GL+    A  +Y +GL IDPNN+                         N   +A     +   +  DP  +SY +++     +  N +K I  NP N+ + L       + GV     FK    G+D E
Sbjct:    7 AQRLKELGNKCFQEGKYEEAVKYFSDAITNDPLDHVLYSNLSGAFASLGRFYEALESANKCISIKKDWPKGYIRKGCAEHGLRQLSNAEKTYLEGLKIDPNNK-------------SLQDALSKVRNENMLENAQLIAHLNNIIENDPQLKSYKEENSNYPHELLNTIKSINSNPMNIRIILSTCHPKISEGVEKFFGFKFTGEGNDAE 202          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGTB_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18
Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407
            AD+ K +GN      +Y AAV  +T+AI L P+N V Y NR+AA + L +Y DA+ D +K + +   +SK Y R+G A   L  + EAV SY+K LD+DP N+
Sbjct:   85 ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLDPEND 187          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGTB_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.282e-18
Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407
            AD+ K +GN      +Y AAV  +T+AI L P+N V Y NR+AA + L +Y DA+ D +K + +   +SK Y R+G A   +  + EAV SY+K LD+DP N+
Sbjct:   85 ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPEND 187          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGTB_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.282e-18
Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407
            AD+ K +GN      +Y AAV  +T+AI L P+N V Y NR+AA + L +Y DA+ D +K + +   +SK Y R+G A   +  + EAV SY+K LD+DP N+
Sbjct:   85 ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPEND 187          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGT2_YEAST (Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Saccharomyces cerevisiae GN=SGT2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.599e-18
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNN 404
            A++ K +GN A ++ DYE A+  +TEAI + P N + Y+NR+AAH+SL  Y  A+ DA+  + + P + +GYSRLG A        EA+ +YKK LDI+ +N
Sbjct:  102 AEDLKMQGNKAMANKDYELAINKYTEAIKVLPTNAIYYANRAAAHSSLKEYDQAVKDAESAISIDPSYFRGYSRLGFAKYAQGKPEEALEAYKKVLDIEGDN 203          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGTA_HUMAN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17
Identity = 43/103 (41.75%), Postives = 66/103 (64.08%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407
            A+  K +GN      ++EAAV  + +AI L+P N V + NR+AA++ L NYA A+ D ++ + + P +SK Y R+G A   L  ++EAV  YKK L++DP+NE
Sbjct:   91 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNE 193          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGT2_SCHPO (Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Schizosaccharomyces pombe GN=sgt2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.779e-17
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407
            A++ K +GN A ++ DY+ A+  +T+AI + P + V YSNR+AA+  L  + +A+ DA   + L P  ++ + RLG A L L D   A ++YKKGLD DPNNE
Sbjct:   83 AEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNE 185          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGTA_BOVIN (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.084e-17
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407
            A+  K +GN      ++EAAV  + +AI L+P N V + NR+AA++ L NYA A+ D ++ + + P +SK Y R+G A   L  + EAV  Y+K L++DP+NE
Sbjct:   91 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPSYSKAYGRMGLALSSLNKHTEAVAYYRKALELDPDNE 193          
BLAST of CK938493 vs. ExPASy Swiss-Prot
Match: SGTA_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 3
Query:   99 ADEAKAKGNAAFSSGDYEAAVRHFTEAISLSPDNHVLYSNRSAAHASLHNYADALADAKKTVELKPDWSKGYSRLGAAHLGLQDYIEAVNSYKKGLDIDPNNE 407
            A+  K +GN      ++EAAV  + +AI L+P N V + NR+AA++ L NY  A+ D ++ + + P +SK Y R+G A   L  + EAV  YKK L++DP+N+
Sbjct:   91 AERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDND 193          
The following BLAST results are available for this feature:
BLAST of CK938493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
STI1L_PLAF74.003e-2432.29STI1-like protein OS=Plasmodium falciparum (isolat... [more]
STI1L_PLAFA4.142e-2133.01STI1-like protein (Fragment) OS=Plasmodium falcipa... [more]
SGTB_HUMAN2.513e-1843.69Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTB_RAT3.282e-1842.72Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTB_MOUSE3.282e-1842.72Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGT2_YEAST5.599e-1843.14Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTA_HUMAN2.128e-1741.75Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGT2_SCHPO2.779e-1742.72Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTA_BOVIN8.084e-1740.78Small glutamine-rich tetratricopeptide repeat-cont... [more]
SGTA_RAT3.072e-1639.81Small glutamine-rich tetratricopeptide repeat-cont... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004441_H12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938493 ID=CK938493; Name=CK938493; organism=Citrus sinensis; type=EST; length=835bp
GGGGAAAGGAGAAGTTCAAAGGGCAGTACTTTGCTCTAAATATTACTGCA
ACCACAACCACAAGCCAATCATTCTTCAATTAATTCCTTGCTGACATGGC
AGACGAAGCCAAAGCGAAAGGAAACGCTGCGTTTTCGTCCGGGGATTACG
AAGCCGCGGTGCGCCACTTCACGGAGGCCATCTCTTTATCTCCGGATAAT
CACGTGCTGTATTCCAATCGATCCGCCGCGCACGCATCTCTCCACAACTA
CGCCGACGCCTTAGCCGACGCCAAGAAGACCGTCGAGCTTAAGCCGGACT
GGTCCAAAGGCTACAGCCGACTTGGCGCTGCTCACCTCGGATTACAGGAC
TATATCGAAGCTGTTAACTCCTACAAGAAAGGACTTGATATCGATCCTAA
CAATGAAGCCCTCAAATCCGGCTTGGCCGATGCTAAAGCGGCGGCCTCCG
CGTCGTTCAGATCTCGTTCCCCGCCGGCCGATAATCCATTTGGTTCTGCT
TTTGCCGGACCTGAGATGTGGGCAAAATTAACGGCGGATCCGACTACGAG
AAGTTATCTCGACCAAGATGATTTTCGTAATATGATGAAGGATATTCAGA
GAAATCCTAACAACTTAAACTTATACTTGAAGGACCAGCGGGTGATGCAG
GCTTTGGGGGTTTTATTAAATGTGAAGTTTAAGGGGCCCACTGGTGGTGA
TGACGTGGAAATGCAGGACGAAGATGCCCCAAAAGGACCGGAGACGTCTA
AGGAGGAGACGAGGAAGCCGGAGTCTGAGCCCGAGCCTGAGCCAATGGAG
CTAACGGAGGAGGAGAAGGAAGCTAAGGAAAGAAA
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