EY665940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 4.244e-75 Identity = 137/178 (76.97%), Postives = 151/178 (84.83%), Query Frame = 1 Query: 70 DNPTCVQLPGMYY*EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANANAIQSGNFY 603 DNPT VQLPGMY +EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR DNV +D+VK+VD FPGQSIDFFGALRARVYDDEVR W L+NS + PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYL EAALG+ANA+AI +G+F+ Sbjct: 263 DNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 7.240e-75 Identity = 136/177 (76.84%), Postives = 151/177 (85.31%), Query Frame = 1 Query: 70 DNPTCVQLPGMYY*EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANANAIQSGNF 600 DNPT VQLPGMY +EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRARVYDDEVR W L+NS + PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLA+ YL EAALG+ANA+AI +GNF Sbjct: 263 DNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 8.004e-74 Identity = 134/175 (76.57%), Postives = 150/175 (85.71%), Query Frame = 1 Query: 70 DNPTCVQLPGMYY*EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANANAIQSG 594 DNPT VQLPGMY +EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ +VK+VD+FPGQSIDFFGALRARVYDDEVR W L+NS++ PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLA+ YL EAALG+ANA+AI +G Sbjct: 258 DNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.575e-72 Identity = 134/178 (75.28%), Postives = 149/178 (83.71%), Query Frame = 1 Query: 70 DNPTCVQLPGMYY*EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANANAIQSGNFY 603 DNPT VQLPGMY E+N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V + DIV+LVD PGQSIDFFGALRARVYDDEVR W LVNSKE PTF+QP+MT++KLL Y +M+VQEQENVKRVQLAD+YL+EAALG AN +AI+SG+F+ Sbjct: 263 DNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 8.023e-66 Identity = 122/154 (79.22%), Postives = 131/154 (85.06%), Query Frame = 1 Query: 70 DNPTCVQLPGMYY*EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQL 531 DNPT VQLPGMY EENPRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG+C GIFR D V +DIVKLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE+ PTF+QP+MT+EKLLEYGNM+V EQENVKRV+L Sbjct: 256 DNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.496e-53 Identity = 106/164 (64.63%), Postives = 120/164 (73.17%), Query Frame = 1 Query: 70 DNPTCVQLPGMYY*EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAAL 561 DNPT VQLPG+Y EE PRVPI+ TGNDFSTLYAPLIRDGRMEK+YW PTREDRIGVC GIF+ DNV ++ LVDTFPGQSIDFFGALRARVYDD VR W LVN+++ + M + L++YG +V EQENVKRVQLAD YLS A L Sbjct: 232 DNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQKV-AMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.609e-44 Identity = 88/160 (55.00%), Postives = 114/160 (71.25%), Query Frame = 1 Query: 70 DNPTCVQLPGMYY*EENP--RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKY 543 DNPT VQLPG Y + NP RVPIIVTGNDFSTLYAPLIRDGRMEKFYW P R+D++G+ GIF D ++ +I +LVDTFP QSIDFF ALR+R+YD ++R++ +VNS EA P F++P ++ L+E GN+++ EQ+ V QL D+Y Sbjct: 132 DNPTDVQLPGSY--DSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.127e-43 Identity = 90/190 (47.37%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 70 DNPTCVQLPGMYY*EENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANANAIQSGNFYGKAAQQNECSSS 639 DNPT VQLPG Y RVPIIVTGNDFSTLYAPLIRDGRMEKFYW P R++++G+ GIF D ++ D+ KLVD+FP QSIDFF ALR+R+YD+++R++ +VNS E P F++P T+ L+E N +V EQ+ ++ QL D+Y N + G Y A+ E ++S Sbjct: 132 DNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY-----------NRLNRGRSYQPASPVAEIATS 310
BLAST of EY665940 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.033e-13 Identity = 45/73 (61.64%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 124 RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALR 342 RVPIIVTGNDFSTLYAPLI RIGVC GIFR LVDTFPGQSIDFFGALR Sbjct: 95 RVPIIVTGNDFSTLYAPLI----------------RIGVCTGIFR-----------LVDTFPGQSIDFFGALR 140 The following BLAST results are available for this feature:
BLAST of EY665940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665940 ID=EY665940; Name=EY665940; organism=Citrus sinensis; type=EST; length=892bpback to top |