CK938426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A2C_HUMAN (Histone H2A type 2-C OS=Homo sapiens GN=HIST2H2AC PE=1 SV=4) HSP 1 Score: 129.413 bits (324), Expect = 1.825e-29 Identity = 65/105 (61.90%), Postives = 76/105 (72.38%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 471 LQFPVGR+ R L+ G YAERVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT + +K+ Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKS 128
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A2C_BOVIN (Histone H2A type 2-C OS=Bos taurus GN=HIST2H2AC PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.825e-29 Identity = 65/105 (61.90%), Postives = 76/105 (72.38%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 471 LQFPVGR+ R L+ G YAERVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT + +K+ Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKS 128
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A3_CHICK (Histone H2A-III OS=Gallus gallus PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.383e-29 Identity = 65/105 (61.90%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 471 LQFPVGR+ R L+ G YAERVGAGAP GN ARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT + +KA Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNPARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTDSHKAKA 128
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A_EMENI (Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 64/102 (62.75%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSG 462 L FPVGR+ R L+ G YA+RVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNIH LLPKKT +G Sbjct: 25 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKAG 126
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A_COCIM (Histone H2A OS=Coccidioides immitis GN=HTA1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADE 480 L FPVGR+ R L+ G YA+RVGAGAP GNAARDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGVMP IH LLPKKT +G + E Sbjct: 25 LAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVMPYIHQNLLPKKTPKTGKNPSQE 132
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A2B_MOUSE (Histone H2A type 2-B OS=Mus musculus GN=Hist2h2ab PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 450 LQFPVGR+ R L+ G YAERVGAGAP GNAARDNKKTRI+PRH+QLAVRNDEEL+KLLG VTIA GGV+PNI +LLPKKT Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A2B_HUMAN (Histone H2A type 2-B OS=Homo sapiens GN=HIST2H2AB PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 65/98 (66.33%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 450 LQFPVGR+ R L+ G YAERVGAGAP GNAARDNKKTRI+PRH+QLAVRNDEEL+KLLG VTIA GGV+PNI +LLPKKT Sbjct: 24 LQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A1A_HUMAN (Histone H2A type 1-A OS=Homo sapiens GN=HIST1H2AA PE=1 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 65/105 (61.90%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKA 471 LQFPVGRI R L+ G YAER+GAGAP GNA+RDNKKTRI+PRH+QLA+RNDEEL+KLLG VTIA GGV+PNI +LLPKKT + KA Sbjct: 24 LQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTESHHHKA 128
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 63/110 (57.27%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 157 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGTSGSKAADEDS 486 LQFPVGRI R+LK G+YA+ VG GAP GNAARDNKKTRI+PRH+ LA+RNDEEL KLLG VTIA+GGV+PNI+ +LLPKKT S +++ Sbjct: 37 LQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKTAEKASSGGSKEA 146
BLAST of CK938426 vs. ExPASy Swiss-Prot
Match: H2A_CAEEL (Histone H2A OS=Caenorhabditis elegans GN=his-3 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 69/123 (56.10%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 85 MAGRGKTLXXXXXXXXXXXXXXXXLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTG 453 M+GRGK LQFPVGR+ R L+ G YA+RVGAGAP GNAARDNKKTRI PRH+QLAVRNDEEL+KLL VTIA GGV+PNI +LLPKKTG Sbjct: 1 MSGRGKGGKAKTGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123 The following BLAST results are available for this feature:
BLAST of CK938426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 235
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938426 ID=CK938426; Name=CK938426; organism=Citrus sinensis; type=EST; length=702bpback to top |